Information on SUBCLASS 6.25.1 |
Subclass Accession number: 4115
Subclass: 6.25.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 56.5 +/- 17.8 Average RMSD (Å) : 0.250 +/- 0.100 Consensus geometry
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Consensus Sequence: | DXDhcVGphp |
(φψ)-conformation: | bpabpaeppa |
Pattern: | [RT] | [HY] | [SV] | [NR] | [DE] | [FI] | [D] | [ASV] | [DK] | [ILV] | [DEN] | [V] | [G] | [DET] | [IL] | [EQ] | [KM] | [V] | [K] | [F] | [IL] | [W] | [NY] |
Conservation: | -0.729 | 0.668 | -1.193 | -0.339 | 0.014 | -0.413 | 1.073 | -1.198 | -0.499 | -0.473 | -0.460 | 0.144 | 1.073 | -0.853 | -0.313 | -0.085 | -0.657 | 0.144 | 0.609 | 1.073 | -0.313 | 3.394 | -0.668 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bu8_A_381 | 1bu8 | A | 381 | 403 | RHVRDIDVDINVGEIQKVKFLWN | EEEEEEEESS---SEEEEEEEEE | bbbbxbxxabbaexxabbbbbbb |
1gpl_*_381 | 1gpl | - | 381 | 403 | THSNEFDSDVDVGDLQMVKFIWY | EEEEEEEESS---SEEEEEEEEE | xbbbbbbxabxaexxabbbbbbb |
1hpl_A_381 | 1hpl | A | 381 | 403 | TYSNEFDSDVEVGDLEKVKFIWY | EEEEEEEESS---SEEEEEEEEE | bbbbbbbxabxaexxabbbbbbb |
1rp1_*_381 | 1rp1 | - | 381 | 403 | THSNEFDAKLDVGTIEKVKFLWN | EEEEEEEESS--SSEEEEEEEEE | bbbbbbbxabxaexxabbbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bu8_A_381 | 1bu8 | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 389 |
Clusters included in this Subclass |
CLUSTER: AR.5.168 |