Information on SUBCLASS 6.40.1 |
Subclass Accession number: 4130
Subclass: 6.40.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 4.1 (>50 %) 4.1.1 (>50 %) GO : GO:0016829 (>50 %) GO:0016830 (>50 %) GO:0016831 (>50 %) SCOP : 50614 (>50 %) 50621 (>50 %) 88683 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 21.4 +/- 19.5 Average RMSD (Å) : 0.967 +/- 0.379 Consensus geometry
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Consensus Sequence: | XhEhXhXpXX |
(φψ)-conformation: | bbpbbpgpbb |
Pattern: | x | x | [KL] | [FP] | [E] | [CMV] | [GKQ] | [APV] | [GS] | [DEQ] | [RWY] | [HL] | [LV] | [FL] |
Conservation: | -1.260 | -1.075 | -0.523 | -0.209 | 2.533 | -0.150 | -0.705 | -0.798 | 0.792 | 0.590 | -0.058 | -0.563 | 0.557 | 0.871 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1knw_A_359 | 1knw | A | 359 | 372 | RALPEVKAGDYLVL | EEEE---TT-EEEE | bxbpxxbpgxbbbx |
1o59_A_135 | 1o59 | A | 138 | 151 | VEKFECGPSQRHLF | EEEEE--TT-EEEE | bxpbxbbxlbxbbb |
2tod_A_365 | 2tod | A | 370 | 383 | YYLPEMQVGEWLLF | EEE----TT-EEEE | bxbxxbbpgxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | I - 137 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | V - 138 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | E - 139 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | F - 141 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | F - 151 |
1o59_A_135 | 1o59 | A | MSESELENOMETHIONINE | V - 152 |
Clusters included in this Subclass |
CLUSTER: AR.6.180 |