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PDB code:

Information on SUBCLASS 6.46.1

Subclass Accession number: 4136 Subclass: 6.46.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005515 (>75 %)  GO:0008270 (>75 %)   SCOP : 57902 (>75 %)  57903 (>75 %)  57904 (>75 %)

Number of loops: 3 Average sequence ID (%) : 36.4 +/- 15.7 Average RMSD (Å) : 0.167 +/- 0.058 Consensus geometry d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1dvp_A_186	1dvp	A	186	196	VFCGQCTAKQC	EE-STTS-EEE	bbxaaaaabbb
1joc_A_1380	1joc	A	1380	1390	IFCAECSAKNA	EE-GGGS-EEE	bbxaaaaabbb
1vfy_A_198	1vfy	A	198	208	VFCQEHSSNSI	EE-GGGS-EEE	bbxaaaaabbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1dvp_A_186	1dvp	A	CITCITRIC ACID	V - 186
1dvp_A_186	1dvp	A	ZNZINC ION	F - 187
1dvp_A_186	1dvp	A	ZNZINC ION	C - 188
1dvp_A_186	1dvp	A	ZNZINC ION	G - 189
1dvp_A_186	1dvp	A	ZNZINC ION	Q - 190
1dvp_A_186	1dvp	A	ZNZINC ION	C - 191
1joc_A_1380	1joc	A	ITPPHOSPHORIC ACID MONO-(2,3,4,6-TETRAHYDROXY-5-PHOSPHONOOXY-CYCLOHEXYL) ESTER	I - 1380
1joc_A_1380	1joc	A	ZNZINC ION	F - 1381
1joc_A_1380	1joc	A	ZNZINC ION	C - 1382
1joc_A_1380	1joc	A	ZNZINC ION	A - 1383
1joc_A_1380	1joc	A	ZNZINC ION	E - 1384
1joc_A_1380	1joc	A	ZNZINC ION	C - 1385
1vfy_A_198	1vfy	A	ZNZINC ION	F - 199
1vfy_A_198	1vfy	A	ZNZINC ION	C - 200
1vfy_A_198	1vfy	A	ZNZINC ION	Q - 201
1vfy_A_198	1vfy	A	ZNZINC ION	E - 202
1vfy_A_198	1vfy	A	ZNZINC ION	H - 203

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1vfy_A_198	1vfy	A	ZNAZINC ION A LIGANDING RESIDUES	C - 200
1vfy_A_198	1vfy	A	ZNAZINC ION A LIGANDING RESIDUES	H - 203

Clusters included in this Subclass

CLUSTER: AR.5.196

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