ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.6.1

Subclass Accession number: 4193
Subclass: 8.6.1

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 14

Average sequence ID (%) : 85.4 +/- 11.6
Average RMSD (Å) : 0.414 +/- 0.141

Consensus geometry

d (Å): 13

delta (°): 135-180

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	VXSSpWPSppVT
(φψ)-conformation:	bpaaabwabpbb

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	1.486	-0.539	0.003	-0.629	0.003	-1.429	0.003	0.497	0.003	-1.171	-0.713	0.003	-1.195	-0.383	1.486	-0.788	-0.235	-0.601	-0.233	-1.017	2.475	0.991	0.003	0.003	1.980

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1jfq_H_483	1jfq	H	483	507	YTLSSSVTVPSSPRPSETVTCNVAH	EEEEEEEEEETTTTTTS--EEEEEE	xbbbbbbbbwaaaxwabxbbbbbbb
1lk3_H_180	1lk3	H	181	205	YTLTSSVTVPSSTWPSQTVTCNVAH	EEEEEEEEEEGGGTTTS--EEEEEE	xbbbbbbbbxaaabwabxbbxbbbb
1lo0_H_181	1lo0	H	181	205	YTLSSSVTVTSSTWPSQSITCNVAH	EEEEEEEEEEGGGSSSS--EEEEEE	xbbbbbbbbpaaabwabxbbbbbbb
1mex_H_184	1mex	H	185	209	YTLSSSVTVPSSTWPSQSVTCNVAH	EEEEEEEEEEGGGTTTS--EEEEEE	xbbbbbbbbxaaabwabxbbxbbbb
1mj8_H_184	1mj8	H	185	209	YTLSSSVTVTSSTWPSQSITCNVAH	EEEEEEEEEETTTTTTS--EEEEEE	xbbbbbbbbxaaabwabxbbxbbbb
1ncw_H_184	1ncw	H	185	209	YTLSSSVTVTSSTWPSQSITCNVAH	EEEEEEEEEEGGGTTTS--EEEEEE	bbbbbbbbbxaaabwabxbbxbbbb
1pz5_B_174	1pz5	B	175	199	YSLSSLVTVPSSTWPSQTVICNVAH	EEEEEEEEE-GGGTTTS--EEEEEE	xbbbbbbbbxaaabwabpbbbbbbb
1q0x_H_184	1q0x	H	185	209	YTLSSSVTVSASSWPGQSVTCNVAH	EEEEEEEEEETTTTTTS--EEEEEE	xbbbbbbbbxaaabwabxbbxbbbb
1q9r_B_172	1q9r	B	173	197	YTLSSSVTVPSSTWPSETVTCNVAH	EEEEEEEEEETTTTTTS--EEEEEE	xbbbbbbbbxaaabwabxbbxbbbb
1r3j_B_180	1r3j	B	180	204	YTLSSSVTVPSSSWPSETVTCNVAH	EEEEEEEEEEGGGTTTS--EEEEEE	xbbbbbbbbpaaabwabxbbbbbbb
1rih_H_174	1rih	H	175	199	YTLSSSVTVPSSTWPSETVTCNVAH	EEEEEEEEEETTSTTTS--EEEEEE	xbbbbbbbbxaaNbwabxbbbbbbb
1rur_H_184	1rur	H	185	209	YTLSSSVTVPSSTWPSETVTCNVAH	EEEEEEEEEEGGGTTTS--EEEEEE	xbbbbbbbbxaaabwaxpbbxbbbb
1wej_H_178	1wej	H	179	203	YTLTSSVTVPSSTWPSQTVTCNVAH	EEEEEEEEEETTTTTTS--EEEEEE	xbbbbbbbbxaaabwabxbbxbbbb
2pcp_B_184	2pcp	B	185	209	YTLSSSVTVTSSPRPSETVTCNVAH	EEEEEEEEEETTTTTTS---EEEEE	bbbbbbbxbxaaaxwabxbbxbbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass