Logo
Information on SUBCLASS 6.9.1
Subclass Accession number: 420
Subclass: 6.9.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.1 (>75 %)  2.1.3 (>75 %)  2.1.3.36.1 (>75 %)  6.1.1 (>75 %)  
GO : GO:0004585 (>75 %)  GO:0004812 (>75 %)  GO:0005200 (>75 %)  GO:0005524 (>75 %)  GO:0008452 (>75 %)  GO:0016462 (>75 %)  GO:0016597 (>75 %)  GO:0016741 (>75 %)  GO:0016743 (>75 %)  GO:0016817 (>75 %)  GO:0016818 (>75 %)  GO:0016874 (>75 %)  GO:0016875 (>75 %)  GO:0016876 (>75 %)  GO:0016886 (>75 %)  GO:0030554 (>75 %)  GO:0043176 (>75 %)  
SCOP : 52373 (>75 %)  52374 (>75 %)  52375 (>75 %)  52539 (>75 %)  52540 (>75 %)  52686 (>75 %)  53066 (>75 %)  53067 (>75 %)  53068 (>75 %)  53670 (>75 %)  53671 (>75 %)  53672 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 32.9 +/- 22.7
Average RMSD (Å) : 0.620 +/- 0.130

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: IXhLXphppG
(φψ)-conformation: aalabppabe
Pattern: [K][ST][T][FLMTV][AIL][ANRS][ACILV][IL][AGNQT][cgn][FL]x[KQR][AP][DQST][EGK][G][AEKQR][ILV][ILY][FILV]
Conservation:1.7400.4671.740-0.773-0.279-0.653-0.6510.643-1.066-1.2570.286-1.4560.3840.233-0.591-0.4072.349-0.5780.403-0.270-0.263
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b0u_A_451b0u   A4565KSTFLRCINFLEKPSEGAIIVHHHHHHHHTTSS--SEEEEEEaaaaaaaaalabxxabebbbb
1g6h_A_461g6h   A4666KSTLINVITGFLKADEGRVYFHHHHHHHHTTSS--SEEEEEEaaaaaaaaavabxxabebbbb
1ji0_A_441ji0   A4464KTTTLSAIAGLVRAQKGKIIFHHHHHHHHTTSS--SEEEEEEaaaaaaaaavabxbabebbbb
1jj7_A_5441jj7   A544564KSTVAALLQNLYQPTGGQLLLHHHHHHHHTTSS--SEEEEEEaaaaaaaaavabbpabebbbb
1l2t_A_441l2t   A4464KSTMLNIIGCLDKPTEGEVYIHHHHHHHHTTSS--SEEEEEEaaaaaaaaavabbxabebbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b0u_A_451b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE K - 45
1b0u_A_451b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE S - 46
1b0u_A_451b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 47
1b0u_A_451b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE F - 48
1b0u_A_451b0u   A     ATPADENOSINE-5'-TRIPHOSPHATE E - 56
1g6h_A_461g6h   A     MGMAGNESIUM ION K - 46
1g6h_A_461g6h   A     ADPADENOSINE-5'-DIPHOSPHATE K - 46
1g6h_A_461g6h   A     MGMAGNESIUM ION S - 47
1g6h_A_461g6h   A     ADPADENOSINE-5'-DIPHOSPHATE S - 47
1g6h_A_461g6h   A     MGMAGNESIUM ION T - 48
1g6h_A_461g6h   A     ADPADENOSINE-5'-DIPHOSPHATE T - 48
1g6h_A_461g6h   A     ADPADENOSINE-5'-DIPHOSPHATE L - 49
1g6h_A_461g6h   A     ADPADENOSINE-5'-DIPHOSPHATE N - 51
1g6h_A_461g6h   A     ADPADENOSINE-5'-DIPHOSPHATE L - 57
1ji0_A_441ji0   A     ATPADENOSINE-5'-TRIPHOSPHATE K - 44
1ji0_A_441ji0   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 45
1ji0_A_441ji0   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 46
1ji0_A_441ji0   A     MSESELENOMETHIONINE T - 47
1ji0_A_441ji0   A     MSESELENOMETHIONINE L - 48
1ji0_A_441ji0   A     MSESELENOMETHIONINE I - 51
1ji0_A_441ji0   A     MSESELENOMETHIONINE A - 52
1ji0_A_441ji0   A     MSESELENOMETHIONINE F - 64
1jj7_A_5441jj7   A     MGMAGNESIUM ION K - 544
1jj7_A_5441jj7   A     ADPADENOSINE-5'-DIPHOSPHATE K - 544
1jj7_A_5441jj7   A     MGMAGNESIUM ION S - 545
1jj7_A_5441jj7   A     ADPADENOSINE-5'-DIPHOSPHATE S - 545
1jj7_A_5441jj7   A     MGMAGNESIUM ION T - 546
1jj7_A_5441jj7   A     ADPADENOSINE-5'-DIPHOSPHATE T - 546
1jj7_A_5441jj7   A     ADPADENOSINE-5'-DIPHOSPHATE V - 547
1jj7_A_5441jj7   A     ADPADENOSINE-5'-DIPHOSPHATE Y - 555
1l2t_A_441l2t   A     ATPADENOSINE-5'-TRIPHOSPHATE S - 45
1l2t_A_441l2t   A     ATPADENOSINE-5'-TRIPHOSPHATE M - 47
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1b0u_A_451b0u   A PLPP-LOOPK - 45

Clusters included in this Subclass
CLUSTER: HE.6.49