ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.16.1

Subclass Accession number: 4245
Subclass: 9.16.1

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
SCOP : 48942 (>75 %)

Number of loops: 3

Average sequence ID (%) : 84.0 +/- -55.0
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	TVXSSTWPSQphX
(φψ)-conformation:	bbpaaabwabpbb

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	1.021	-0.858	-0.305	-0.305	-0.305	-1.631	-0.305	0.137	-0.305	-0.968	-0.305	-0.305	0.137	2.790	1.021	-0.305	0.137	-0.858	-0.526	-1.300	1.906	0.579	-0.305	-0.305	1.463

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ay1_H_171	1ay1	H	171	195	YTLSSSVTVTSSTWPSQSITCNVAH	EEEEEEEE--TTTTTTS--EEEEEE	bbbbbbbbbxaaabwaxpbbbbbbb
1mju_H_184	1mju	H	185	209	YTLSSSVTVTSSTWPSQSITCNVAH	EEEEEEEEE-TTTTTTS--EEEEEE	xbbbbbbbbxaaabwabxbbxbbbb
1pz5_B_174	1pz5	B	175	199	YSLSSLVTVPSSTWPSQTVICNVAH	EEEEEEEEE-GGGTTTS--EEEEEE	xbbbbbbbbxaaabwabpbbbbbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1mju_H_184	1mju	H	GOLGLYCEROL	S - 202

Clusters included in this Subclass