Logo
Information on SUBCLASS 6.16.1
Subclass Accession number: 427
Subclass: 6.16.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  2.7 (>50 %)  2.7.7 (>50 %)  2.7.7.73.2 (>75 %)  3.2.1 (>75 %)  3.2.1.17
GO : GO:0003677 (>50 %)  GO:0003796 (>75 %)  GO:0003887 (>50 %)  GO:0004518 (>50 %)  GO:0004527 (>50 %)  GO:0004553 (>75 %)  GO:0016772 (>50 %)  GO:0016779 (>50 %)  GO:0016788 (>50 %)  GO:0016798 (>75 %)  
SCOP : 53954 (>75 %)  53955 (>75 %)  53960 (>75 %)  56671 (>75 %)  56672 (>75 %)  56673 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 66.7 +/- -13.4
Average RMSD (Å) : 0.400 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhhXLXVPLp
(φψ)-conformation: aabwbabpbb
Pattern: xxxxxxxxxxxxxxxxxxxxxxxx
Conservation:1.059-1.302-0.757-0.2121.0590.333-1.120-0.7571.0590.3331.0591.059-1.302-1.120-0.938-0.7570.333-1.3020.3332.5120.333-0.3930.3330.151
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bgx_T_7971bgx   T797820EAVARLAKEVMEGVYPLAVPLEVEHHHHHHHHHHHHSSS--SS---EEaaaaaaaaaaaaaabwbabxxbbx
1nk4_A_8411nk4   A842865ERLCRLVPEVMEQAVTLRVPLKVDHHHHHHHHHHHHTSS--SS---EEaaaaaaaaaaaaaabbbabxbbbb
1qtm_A_7961qtm   A797820EAVARLAKEVMEGVYPLAVPLEVEHHHHHHHHHHHHTSS--SS---EEaaaaaaaaaaaaaabwbabxbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qtm_A_7961qtm   A     TTPTHYMIDINE-5'-TRIPHOSPHATE E - 820

Clusters included in this Subclass
CLUSTER: HE.11.4