Information on SUBCLASS 12.6.1 |
Subclass Accession number: 4287
Subclass: 12.6.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>75 %) 2.7.1 (>75 %) 2.7.1.693.4 (>75 %) 3.4.21 (>75 %) GO : GO:0004175 (>75 %) GO:0004252 (>75 %) GO:0005351 (>50 %) GO:0005386 (>50 %) GO:0005509 (>75 %) GO:0008233 (>75 %) GO:0008236 (>75 %) GO:0008982 (>50 %) GO:0015144 (>50 %) GO:0015290 (>50 %) GO:0015291 (>50 %) GO:0015455 (>50 %) GO:0016772 (>50 %) GO:0016773 (>50 %) GO:0051119 (>50 %) SCOP : 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) 51229 (>75 %) 51261 (>75 %) 51262 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 27.3 +/- 22.1 Average RMSD (Å) : 1.150 +/- 0.404 Consensus geometry
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Consensus Sequence: | XhXHhhpXpXchpXhX |
(φψ)-conformation: | bbaaaaaapabaaabb |
Pattern: | [W] | [LV] | [ILV] | [STV] | [AP] | [AST] | [H] | [AC] | [FLY] | x | x | x | [KP] | [DKNR] | x | [ERS] | x | [LMY] | x | [AFV] | [IVY] | [FL] |
Conservation: | 3.339 | 0.128 | 0.097 | -0.437 | -0.090 | -0.184 | 2.179 | 0.863 | 0.100 | -0.771 | -0.728 | -0.916 | 0.028 | -0.384 | -0.723 | -0.286 | -0.602 | -0.182 | -0.826 | -0.525 | -0.118 | 0.039 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ddj_A_597 | 1ddj | A | 597 | 618 | WVLTAAHCLEKSPRPSSYKVIL | EEEE-GGGGTT-S-GGG-EEEE | bbbbbaaaaaabaxaaabbbbb |
1gj7_B_51 | 1gj7 | B | 51 | 72 | WVISATHCFIDYPKKEDYIVYL | EEEE-GGGTTT---GGGEEEEE | bbbbbaaaaaabaxaaabbbbb |
1hav_A_38 | 1hav | A | 38 | 59 | WLLVPSHAYKFEKDYEMMEFYF | EEEEEGGGTTT-S-GGG-EEEE | bbbbxaaaaaaxabaaaxbbbb |
1kli_H_51 | 1kli | H | 51 | 72 | WVVSAAHCFDKIKNWRNLIAVL | EEEE-GGGGTT-S-GGGEEEEE | bbbbbaaaaaaxabaaaxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gj7_B_51 | 1gj7 | B | 1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE | H - 57 |
1gj7_B_51 | 1gj7 | B | 1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE | C - 58 |
1gj7_B_51 | 1gj7 | B | 1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE | F - 59 |
1gj7_B_51 | 1gj7 | B | 1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE | I - 60 |
1kli_H_51 | 1kli | H | GOLGLYCEROL | A - 56 |
1kli_H_51 | 1kli | H | BENBENZAMIDINE | H - 57 |
1kli_H_51 | 1kli | H | GOLGLYCEROL | F - 59 |
1kli_H_51 | 1kli | H | GOLGLYCEROL | D - 60 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hav_A_38 | 1hav | A | PROCYS-HIS DYAD AND STABILIZING ELECTROSTATIC ENVIRONMENT ( CYS 172, HIS 44, TYR 143). | H - 44 |
Clusters included in this Subclass |
CLUSTER: AR.13.9 |