Information on SUBCLASS 12.13.1 |
Subclass Accession number: 4294
Subclass: 12.13.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.99 (>75 %) 1.1.99.8 GO : GO:0005509 (>75 %) GO:0016614 (>75 %) GO:0018468 (>75 %) SCOP : 50997 (>75 %) 50998 (>75 %) 50999 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 81.7 +/- -49.4 Average RMSD (Å) : 0.167 +/- 0.058 Consensus geometry
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Consensus Sequence: | ICPSAMGhHNQGXDSY |
(φψ)-conformation: | pbwpaaeabbapppbb |
Pattern: | [AG] | [KRT] | [DN] | [I] | [C] | [P] | [S] | [A] | [M] | [G] | [FY] | [H] | [N] | [Q] | [G] | [HV] | [D] | [S] | [Y] | [D] |
Conservation: | -1.306 | -1.718 | -0.786 | -0.532 | 2.008 | 0.992 | -0.532 | -0.532 | -0.024 | 0.484 | -0.145 | 1.500 | 0.484 | -0.024 | 0.484 | -1.776 | 0.484 | -0.532 | 0.992 | 0.484 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g72_A_375 | 1g72 | A | 375 | 394 | GTNICPSAMGFHNQGVDSYD | EEEESS-TT-SS-S-B-EEE | xblxbwxaaeabbaxbxbbb |
1h4i_A_382 | 1h4i | A | 382 | 401 | AKDICPSAMGYHNQGHDSYD | EEEEBS-TT-SS-S-B-EEE | xblxbwxaaeabbapxxbbx |
1lrw_A_382 | 1lrw | A | 382 | 401 | ARDICPSAMGYHNQGHDSYD | EEEESS-TT-SS-S-B-EEE | xblxbwxaaeabbapxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g72_A_375 | 1g72 | A | PQQPYRROLOQUINOLINE QUINONE | A - 382 |
1g72_A_375 | 1g72 | A | PQQPYRROLOQUINOLINE QUINONE | M - 383 |
1g72_A_375 | 1g72 | A | PQQPYRROLOQUINOLINE QUINONE | N - 387 |
1g72_A_375 | 1g72 | A | PQQPYRROLOQUINOLINE QUINONE | Q - 388 |
1h4i_A_382 | 1h4i | A | PQQPYRROLOQUINOLINE QUINONE | A - 389 |
1h4i_A_382 | 1h4i | A | PQQPYRROLOQUINOLINE QUINONE | M - 390 |
1h4i_A_382 | 1h4i | A | PQQPYRROLOQUINOLINE QUINONE | N - 394 |
1h4i_A_382 | 1h4i | A | PQQPYRROLOQUINOLINE QUINONE | Q - 395 |
Clusters included in this Subclass |
CLUSTER: AR.12.23 |