Logo
Information on SUBCLASS 12.20.1
Subclass Accession number: 4301
Subclass: 12.20.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005489 (>75 %)  
SCOP : 54235 (>75 %)  54292 (>75 %)  54293 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 52.6 +/- 2.8
Average RMSD (Å) : 0.433 +/- 0.153

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: RLXCQIXhTXXhDchX
(φψ)-conformation: bpaaabppbaaapgpb
Pattern: [S][R][L][GST][C][Q][I][CIK][LMV][T][KPS][AEL][LM][D][GN][ILM][TV][V][DHR]
Conservation:0.2890.7610.289-0.9192.6500.7610.289-1.391-0.4990.761-0.971-1.444-0.0881.233-0.147-0.394-0.5490.289-0.919
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ayf_A_881ayf   A88106SRLGCQICLTKAMDNMTVREEEGGG-B--GGGTTEEEExbxaaabbxbaaapvxbbb
1e9m_A_821e9m   A82100SRLTCQIKVTSLLDGLVVHEEEGGG-B--GGGTTEEEExbxaaabxxbaaaxgpbbb
1oqq_A_821oqq   A82100SRLSCQIIMTPELDGIVVDEEEGGG-B--GGGTTEEEExbxaaaxxxbaaapvpbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ayf_A_881ayf   A     FESFE2/S2 (INORGANIC) CLUSTER L - 90
1ayf_A_881ayf   A     FESFE2/S2 (INORGANIC) CLUSTER G - 91
1ayf_A_881ayf   A     FESFE2/S2 (INORGANIC) CLUSTER C - 92
1ayf_A_881ayf   A     FESFE2/S2 (INORGANIC) CLUSTER Q - 93
1e9m_A_821e9m   A     FESFE2/S2 (INORGANIC) CLUSTER L - 84
1e9m_A_821e9m   A     FESFE2/S2 (INORGANIC) CLUSTER T - 85
1e9m_A_821e9m   A     FESFE2/S2 (INORGANIC) CLUSTER C - 86
1e9m_A_821e9m   A     FESFE2/S2 (INORGANIC) CLUSTER Q - 87
1oqq_A_821oqq   A     FESFE2/S2 (INORGANIC) CLUSTER S - 85
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e9m_A_821e9m   A FESBINDING SITE FOR FES (CLUSTER 2 IRONS-2 SULFURS)C - 86

Clusters included in this Subclass
CLUSTER: AR.11.25