Logo
Information on SUBCLASS 13.1.1
Subclass Accession number: 4302
Subclass: 13.1.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 52.7 +/- 22.8
Average RMSD (Å) : 0.400 +/- 0.100

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: LpLTKhpppGXPXhpSh
(φψ)-conformation: bbabpbpaalppbplbb
Pattern: [L][EQR][L][CT][KR][ITV][KNS][GQS][NSY][G]x[P][aqt][glw][DSW][S][ALTV][G][R][AT][FL][FY]
Conservation:0.539-0.2270.539-0.0560.413-0.412-0.434-0.819-0.6071.520-1.3452.011-1.241-1.494-1.0600.539-0.9521.5201.030-0.267-0.2201.023
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g7y_A_281g7y   A2950LRLTKVKGNGLPTLSSLGRAFYEE-S-B-TTS-B-SS-EEEEEExbabpbxaavbxbxlxbbbbbx
1gzc_A_321gzc   A3253LQLTKINQNGMPAWDSTGRTLYEESS-B-TTS-B-SS-EEEEEExxabpbxaavxxxxlbbbbbbx
1h9w_A_1541h9w   A154175LELTKVSSSGDPQGSSVGRALFEESS-B-TTS-B-SS-EEEEEExbabpbpaavxxbxlbbbbbbx
1hql_A_321hql   A3354LQLCKTNQYGTPLQWSAGRALYEE-S-B-TTS-B-SS-EEEEEEbbabxbxaavxxxxlbbbbbbx
1nls_*_1531nls   -154175LELTRVSSNGSPQGSSVGRALFEESS-B-TTS-B-SS-EEEEEEbxabxbxaavxxbxlbbbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hql_A_321hql   A     NAGN-ACETYL-D-GLUCOSAMINE K - 37
1hql_A_321hql   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 40
1hql_A_321hql   A     NAGN-ACETYL-D-GLUCOSAMINE Y - 41
1hql_A_321hql   A     NAGN-ACETYL-D-GLUCOSAMINE G - 42
1hql_A_321hql   A     NAGN-ACETYL-D-GLUCOSAMINE T - 43
1hql_A_321hql   A     GALD-GALACTOSE W - 47
1hql_A_321hql   A     MBGMETHYL-BETA-GALACTOSE W - 47

Clusters included in this Subclass
CLUSTER: AR.13.5