Information on SUBCLASS 13.2.1 |
Subclass Accession number: 4303
Subclass: 13.2.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 43.8 +/- 25.3 Average RMSD (Å) : 0.360 +/- 0.089 Consensus geometry
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Consensus Sequence: | hXpXXEKIXEchXhphh |
(φψ)-conformation: | bbabaaaappgpaapbb |
Pattern: | x | x | x | [FLVY] | [AIL] | [AG] | [AS] | [DS] | [ADNV] | [KL] | [DE] | [KN] | [I] | x | [E] | [GN] | [AG] | [PS] | [FLM] | [QR] | [nv] | [FY] | [FMVY] | [DER] | [hrs] | [I] |
Conservation: | -0.968 | -0.732 | -0.673 | -0.413 | -0.553 | 0.115 | 0.169 | 0.630 | -1.502 | -0.735 | 1.099 | 0.514 | 1.236 | -1.408 | 1.963 | 0.557 | 0.630 | 0.392 | -0.116 | 0.691 | -1.425 | 1.756 | -0.627 | -0.444 | -1.394 | 1.236 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bj7_*_17 | 1bj7 | - | 17 | 42 | RIIYAAADNKDKIVEGGPLRNYYRRI | EEEEEEESSGGGTSTT-TT--EEEEE | bxabbbbaxaaaaxpgxaaxbxpabb |
1dzk_A_17 | 1dzk | A | 17 | 42 | ITSYIGSSDLEKIGENAPFQVFMRSI | EEEEEEES-GGGTSTT-TT--EEEEE | bxabbbbabaaaaxpvxaaxbbxabb |
1e5p_A_11 | 1e5p | A | 11 | 36 | YTIVIAADNLEKIEEGGPLRFYFRHI | EEEEEE-SSGGGTSTT-TT--EEEEE | bxabbbbabaaaaxpvxaaxbbpabb |
1ew3_A_38 | 1ew3 | A | 38 | 63 | YSIFLASDVKEKIEENGSMRVFVDVI | EEEEEEESSGGGTSTT-TT-EEEEEE | bxabbbbabaaaaxpvxaaxbbxabb |
1gm6_A_23 | 1gm6 | A | 23 | 48 | YSILLASDAKENIEENGSMRVFVEHI | EEEEEEETTGGGGSTT-TT--EEEEE | bxabbbbabaaaaxpvxaaxxbxabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dzk_A_17 | 1dzk | A | PRZ2-ISOBUTYL-3-METHOXYPYRAZINE | T - 18 |
1dzk_A_17 | 1dzk | A | PRZ2-ISOBUTYL-3-METHOXYPYRAZINE | I - 21 |
1dzk_A_17 | 1dzk | A | PRZ2-ISOBUTYL-3-METHOXYPYRAZINE | G - 22 |
1dzk_A_17 | 1dzk | A | PRZ2-ISOBUTYL-3-METHOXYPYRAZINE | F - 35 |
1dzk_A_17 | 1dzk | A | PRZ2-ISOBUTYL-3-METHOXYPYRAZINE | V - 37 |
1dzk_A_17 | 1dzk | A | PRZ2-ISOBUTYL-3-METHOXYPYRAZINE | M - 39 |
1dzk_A_17 | 1dzk | A | PRZ2-ISOBUTYL-3-METHOXYPYRAZINE | I - 42 |
1e5p_A_11 | 1e5p | A | MSESELENOMETHIONINE | I - 15 |
1e5p_A_11 | 1e5p | A | MSESELENOMETHIONINE | A - 16 |
1e5p_A_11 | 1e5p | A | MSESELENOMETHIONINE | A - 17 |
1e5p_A_11 | 1e5p | A | MSESELENOMETHIONINE | D - 18 |
1e5p_A_11 | 1e5p | A | MSESELENOMETHIONINE | I - 23 |
1e5p_A_11 | 1e5p | A | MSESELENOMETHIONINE | L - 29 |
1e5p_A_11 | 1e5p | A | MSESELENOMETHIONINE | F - 31 |
1e5p_A_11 | 1e5p | A | MSESELENOMETHIONINE | I - 36 |
1gm6_A_23 | 1gm6 | A | GOLGLYCEROL | L - 27 |
1gm6_A_23 | 1gm6 | A | GOLGLYCEROL | M - 41 |
1gm6_A_23 | 1gm6 | A | GOLGLYCEROL | V - 43 |
1gm6_A_23 | 1gm6 | A | GOLGLYCEROL | V - 45 |
1gm6_A_23 | 1gm6 | A | CDCADMIUM ION | E - 46 |
1gm6_A_23 | 1gm6 | A | CDCADMIUM ION | H - 47 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1dzk_A_17 | 1dzk | A | AC1PRZ BINDING SITE FOR CHAIN A | F - 35 |
1gm6_A_23 | 1gm6 | A | CAVODOUR-BINDING CAVITY | V - 45 |
1gm6_A_23 | 1gm6 | A | CDCD BINDING SITE FOR CHAIN A | E - 46 |
1gm6_A_23 | 1gm6 | A | CDCD BINDING SITE FOR CHAIN A | H - 47 |
1gm6_A_23 | 1gm6 | A | CAVODOUR-BINDING CAVITY | I - 48 |
Clusters included in this Subclass |
CLUSTER: AR.13.15 |
CLUSTER: AR.15.8 |