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Information on SUBCLASS 13.3.1
Subclass Accession number: 4304
Subclass: 13.3.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 32.5 +/- 20.6
Average RMSD (Å) : 0.550 +/- 0.129

Consensus geometry
d (Å): 19 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XGXhPXhhXphppLXpL
(φψ)-conformation: bepppaaaaapaapabb
Pattern: xx[G][APT][IL][P][DPQ]x[IL][AST][KQS][IL][KPT]x[L][HV]x[IL][DNTY]
Conservation:-1.000-0.9481.947-0.4440.3662.474-0.285-0.9520.366-0.162-0.1920.447-0.544-1.0840.893-0.425-1.0180.447-0.886
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ogq_A_1141ogq   A114131.SGAIPDFLSQIKTLVTLD.EEE--GGGGG-TT--EEE.bexxxaaaaaxaapabbb
1ogq_A_1361ogq   A137155LSGTLPPSISSLPNLVGITEES---GGGGG-TT--EEExbebxxaaaaaxaaxabbb
1ogq_A_2571ogq   A257274.YGTLPQGLTQLKFLHSLN.EE---GGGGG-TT--EEE.bexxxaaaaaxaaxabbb
1ogq_A_891ogq   A89107LVGPIPPAIAKLTQLHYLYEES---GGGGG-TT-SEEExbexxwwaaaaxaapabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ogq_A_891ogq   A     NAGN-ACETYL-D-GLUCOSAMINE T - 109
1ogq_A_891ogq   A     NAGN-ACETYL-D-GLUCOSAMINE H - 110
1ogq_A_891ogq   A     NAGN-ACETYL-D-GLUCOSAMINE T - 111
1ogq_A_2571ogq   A     NAGN-ACETYL-D-GLUCOSAMINE L - 273
1ogq_A_2571ogq   A     NAGN-ACETYL-D-GLUCOSAMINE N - 274
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ogq_A_891ogq   A AC2NAG BINDING SITE FOR CHAIN AH - 110
1ogq_A_891ogq   A AC2NAG BINDING SITE FOR CHAIN AT - 111
1ogq_A_2571ogq   A AC4NAG BINDING SITE FOR CHAIN AN - 274

Clusters included in this Subclass
CLUSTER: AR.13.25
CLUSTER: AR.14.9