Information on SUBCLASS 19.4.1 |
Subclass Accession number: 4333
Subclass: 19.4.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003676 (>75 %) GO:0003677 (>75 %) GO:0003723 (>75 %) GO:0003964 (>75 %) GO:0004175 (>75 %) GO:0004190 (>75 %) GO:0004518 (>75 %) GO:0004519 (>75 %) GO:0004540 (>75 %) GO:0008233 (>75 %) GO:0008270 (>50 %) GO:0008907 (>50 %) GO:0016772 (>75 %) GO:0016779 (>75 %) GO:0016788 (>75 %) SCOP : 56671 (>75 %) 56672 (>75 %) 56686 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 54.3 +/- 4.3 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | LDhcDAhFXhXLpXpXpXhXAFp |
(φψ)-conformation: | bbpplaaaabpppaaaaaaapbb |
Pattern: | [RSW] | [IVY] | [T] | [V] | [L] | [D] | [LV] | [GK] | [D] | [A] | [FY] | [F] | [CS] | [ILV] | [PR] | [L] | [DH] | [EP] | [DT] | x | [QR] | [KP] | [LY] | [FT] | [A] | [F] | [ET] |
Conservation: | -1.746 | -0.945 | 1.095 | 0.439 | 0.439 | 1.750 | -0.537 | -0.989 | 1.750 | 0.439 | 0.968 | 1.750 | -0.505 | -0.435 | -0.795 | 0.439 | 0.063 | -0.584 | -0.663 | -1.125 | -0.207 | -0.282 | -0.606 | -1.046 | 0.439 | 1.750 | -0.857 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mml_*_145 | 1mml | - | 145 | 171 | WYTVLDLKDAFFCLRLHPTSQPLFAFE | EEEEEEBTTGGGGSBB-TTTGGGG-EE | bbbbbbxxlaaaaxxxxaaaaaaaxbx |
1mu2_A_105 | 1mu2 | A | 105 | 131 | RITVLDVGDAYFSIPLHEDFRPYTAFT | EEEEEE-BSSGGGSB--TTTGGGG-EE | bbbbbbxxlaaaabxxpaaaaaaapbb |
1vrt_A_105 | 1vrt | A | 105 | 131 | SVTVLDVGDAYFSVPLDEDFRKYTAFT | EEEEEE-BSTGGGSB--TTTGGGG-EE | bbbbbxxblaaaabxbpaaaaaaaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1vrt_A_105 | 1vrt | A | NEVNEVIRAPINE | V - 106 |
Clusters included in this Subclass |
CLUSTER: AR.18.12 |