ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 22.2.1

Subclass Accession number: 4335
Subclass: 22.2.1

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.1 (>75 %)  3.1.1 (>75 %)  3.1.1.7
GO : GO:0004091 (>50 %)  GO:0016701 (>75 %)  GO:0016702 (>75 %)  GO:0016788 (>50 %)  GO:0016789 (>50 %)  GO:0051213 (>75 %)
SCOP : 53473 (>75 %)  53474 (>75 %)  53475 (>75 %)  54592 (>75 %)  54593 (>75 %)  54602 (>75 %)

Number of loops: 3

Average sequence ID (%) : 92.6 +/- -79.3
Average RMSD (Å) : 0.100 +/- 0.000

Consensus geometry

d (Å): 21

delta (°): 90-135

theta (°): 90-135

rho (°): 225-270

Consensus Sequence:	FFhETpHVERLpXRYDLYSAGELVRL
(φψ)-conformation:	bbapbppbppaaapaaappaappabp

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	1.322	1.322	-0.068	0.627	0.627	-0.241	-0.068	-0.068	-2.151	2.016	-0.762	-0.068	-0.068	-0.762	-1.978	-1.804	-0.068	1.322	0.627	-0.762	1.322	-0.762	-0.762	0.627	-0.068	-0.762	-0.762	-0.068	-0.762	0.627	2.016	0.627	0.627	-0.068	-0.762	-0.068

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1f1u_A_125	1f1u	A	125	160	PYEFFYETEHVERLTQRYDLYSAGELVRLDHFNQVT	EEEEE--B------TT-GGG--TT---EEEEEEEEE	wbbbbaxbxbbxxaaaxaaaxxaapxabxabbbbbb
1f1x_A_125	1f1x	A	125	160	PYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVT	EEEEE--B------TT-TTT--TT---EEEEEEEEE	wxbbbaxbxxbxxaaaxaaaxxaapxabxabbbbbb
1q0o_A_125	1q0o	A	125	160	PYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQVT	EEEEE--B------TT-TTS--TT---EEEEEEEEE	xxbbbapbxxbpxaaaxaaaxxaapxabxabbbbxb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1f1u_A_125	1f1u	A	MW2MANGANESE DIHYDRATE ION	H - 155
1f1u_A_125	1f1u	A	MW2MANGANESE DIHYDRATE ION	F - 156
1f1u_A_125	1f1u	A	MW2MANGANESE DIHYDRATE ION	N - 157
1f1x_A_125	1f1x	A	FELHYDRATED FE	H - 155
1f1x_A_125	1f1x	A	FELHYDRATED FE	F - 156
1f1x_A_125	1f1x	A	FELHYDRATED FE	N - 157
1q0o_A_125	1q0o	A	OF3FERRIC ION, 1 WATER COORDINATED	H - 155
1q0o_A_125	1q0o	A	OF3FERRIC ION, 1 WATER COORDINATED	F - 156
1q0o_A_125	1q0o	A	OF3FERRIC ION, 1 WATER COORDINATED	N - 157

Clusters included in this Subclass