ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 27.1.1

Subclass Accession number: 4343
Subclass: 27.1.1

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.4 (>75 %)  2.4.1 (>75 %)  2.4.1.19
GO : GO:0004175 (>75 %)  GO:0004252 (>75 %)  GO:0004553 (>50 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  GO:0016160 (>50 %)  GO:0016757 (>50 %)  GO:0016798 (>50 %)
SCOP : 49451 (>75 %)  49452 (>75 %)  49453 (>75 %)  50493 (>75 %)  50494 (>75 %)  50514 (>75 %)

Number of loops: 3

Average sequence ID (%) : 57.7 +/- -4.1
Average RMSD (Å) : 0.300 +/- 0.100

Consensus geometry

d (Å): 29

delta (°): 90-135

theta (°): 45-90

rho (°): 315-360

Consensus Sequence:	pLXpphpLcpXVQLhXLPXXcpILhNpXPCY
(φψ)-conformation:	ppabppppbaabbppppwpplpbppplppbb

Pattern:	[A]	[L]	[LV]	[KR]	[L]	[ANS]	[QRT]	[QS]	[AV]	[QST]	[L]	[GN]	[DS]	x	[V]	[Q]	[L]	[AG]	[ANV]	[L]	[P]	[PR]	[AS]	[GN]	[DQT]	[I]	[L]	[AP]	[N]	[EN]	[ANS]	[P]	[C]	[Y]	[I]	[ST]	[G]
Conservation:	0.250	0.250	-0.510	0.011	0.250	-1.022	-1.080	-0.667	-0.756	-1.022	0.250	-0.228	-0.581	-1.485	0.250	0.770	0.250	-0.582	-1.600	0.250	1.811	-0.625	-0.502	-0.212	-1.138	0.250	0.250	-0.461	1.291	-0.319	-1.022	1.811	2.852	1.811	0.250	-0.333	1.291

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1elt_*_104	1elt	-	104	140	ALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITG	EEEEESS----SSS--------TT----TT--EEEEE	bbbxxabbxxxbaabbxxxxwxpvxbxwxvxxbbxbe
1gvk_B_104	1gvk	B	104	140	ALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITG	EEEEESS----BTTB-------TT----TT--EEEEE	bbbxxabxxxxbaabbxxxbwxpvxbxppvxxbbxbe
1pyt_C_504	1pyt	C	504	540	ALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISG	EEEE-SS----SSSS-------TT----TT-EEEEEE	bbbxxabxxxxbaabbxxbxwxpUpbxxpUxwxbxbe

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1gvk_B_104	1gvk	B	SOBSO4 BINDING SITE FOR CHAIN B	G - 127

Clusters included in this Subclass