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Information on SUBCLASS 1.1.20
Subclass Accession number: 4367
Subclass: 1.1.20 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 13.0 +/- 16.8
Average RMSD (Å) : 0.671 +/- 0.198

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 0-45 rho (°): 225-270
Consensus Sequence: hppXX
(φψ)-conformation: aapaa
Pattern: [kns][aenp][FGIVW][afly][QRSY][ns][dkprs]xx[fikmv][aenq]
Conservation:0.647-0.072-0.479-0.2670.7252.550-1.001-0.413-0.840-0.478-0.373
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ei9_A_1681ei9   A168178NAGAYNKAIQEHHHHTSHHHHHaaaaaxaaaaa
1glq_A_1871glq   A190200KAFLSSPEHVNHHHHTSHHHHHaaaaaxaaaaa
1jb0_A_1871jb0   A187197LEWFQNVESMLHHHHT-HHHHHaaaaaxaaaaa
1ktb_A_2751ktb   A278288KKILQNRLMIQHHHHT-HHHHHaaaaapaaaaa
1nvu_S_8811nvu   S881891SPVYRLDHTFEHHHHT-HHHHHaaaaaxaaaaa
1uas_A_2551uas   A258268KNILSNSEVIAHHHHT-HHHHHaaaaaxaaaaa
1urs_A_3351urs   A335345SAVQSSPTFKAHHHHT-HHHHHaaaaaxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A L - 187
1jb0_A_1871jb0   A     CACALCIUM ION W - 189
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A W - 189
1jb0_A_1871jb0   A     CACALCIUM ION F - 190
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A F - 190
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A Q - 191
1jb0_A_1871jb0   A     CACALCIUM ION N - 192
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A N - 192
1jb0_A_1871jb0   A     CACALCIUM ION V - 193
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A V - 193
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A E - 194
1jb0_A_1871jb0   A     CACALCIUM ION S - 195
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A S - 195
1jb0_A_1871jb0   A     CACALCIUM ION M - 196
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A M - 196
1jb0_A_1871jb0   A     CACALCIUM ION L - 197
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A L - 197
1jb0_A_1871jb0   A     CACALCIUM ION N - 198
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A N - 198
1jb0_A_1871jb0   A     CACALCIUM ION H - 199
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A H - 199
1jb0_A_1871jb0   A     CACALCIUM ION H - 200
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A H - 200
1jb0_A_1871jb0   A     CACALCIUM ION L - 201
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A L - 201
1jb0_A_1871jb0   A     CACALCIUM ION A - 202
1jb0_A_1871jb0   A     CL1ALPHA CHLOROPHYLL A A - 202
1ktb_A_2751ktb   A     CRYPROPANE-1,2,3-TRIOL Q - 288

Clusters included in this Subclass
CLUSTER: HH.1.77
CLUSTER: HH.3.104