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Information on SUBCLASS 1.1.28
Subclass Accession number: 4375
Subclass: 1.1.28 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 37.8 +/- 31.6
Average RMSD (Å) : 0.500 +/- 0.271

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hXhXh
(φψ)-conformation: aapaa
Pattern: [FL][GPT][DEQ][LV]x[GP][FTY][LW][KNPR][FIL][AK][kq][KW][q][A]
Conservation:0.475-1.3980.7690.698-0.8400.729-0.2260.207-1.1710.1120.010-1.3290.099-0.5692.434
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g9z_A_811g9z   A88102LTQLQPFLKLKQKQAHHHHGGG-SSSHHHHaaaaaaaxaaaaaaa
1m5x_A_871m5x   A94108LPDLVPYLRIKKKQAHHHHTTT-STTHHHHaaaaaaaxaaaaaaa
1mow_A_1781mow   A185199LTQLQPFLNFKQKQAHHHHGGG-STTHHHHaaaaaaaxaaaaaaa
1odo_A_691odo   A6983FGEVVGTWPLALWVAHHHHTTT-TTTHHHHaaaaaaaxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mow_A_1781mow   A     GOLGLYCEROL I - 178
1mow_A_1781mow   A     GOLGLYCEROL K - 179
1mow_A_1781mow   A     GOLGLYCEROL P - 180
1mow_A_1781mow   A     GOLGLYCEROL P - 190
1mow_A_1781mow   A     GOLGLYCEROL F - 191
1mow_A_1781mow   A     GOLGLYCEROL L - 192
1mow_A_1781mow   A     GOLGLYCEROL N - 193
1odo_A_691odo   A     PIM4-PHENYL-1H-IMIDAZOLE W - 81
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1odo_A_691odo   A AC2PIM BINDING SITE FOR CHAIN AW - 81

Clusters included in this Subclass
CLUSTER: HH.6.112
CLUSTER: HH.8.94