Information on SUBCLASS 1.1.67 |
Subclass Accession number: 4414
Subclass: 1.1.67 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 10.7 +/- 0.0 Average RMSD (Å) : 0.700 +/- 0.000 Consensus geometry
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Consensus Sequence: | pppXX |
(φψ)-conformation: | aapaa |
Pattern: | [LV] | [DK] | [DT] | [L] | [IM] | [AL] | [MY] | [LY] | [EN] | [ES] | [KS] | [PT] | x | [MY] | [AK] | [ES] | [EH] | [FL] | [AE] | [A] | x | x | [AQ] | [RY] | [RS] | [E] | [EH] | [FW] |
Conservation: | 0.043 | -0.196 | -0.196 | 1.478 | 0.282 | -0.914 | 0.043 | -0.196 | 0.282 | -0.196 | -0.196 | 0.043 | -1.870 | 0.043 | -0.675 | -0.196 | 0.760 | 0.043 | -0.675 | 1.478 | -1.153 | -1.631 | -0.675 | -0.436 | -0.675 | 2.434 | 0.760 | 2.195 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dl2_A_84 | 1dl2 | A | 88 | 115 | VDTLMLMYNSSTLYKSEFEAEIQRSEHW | HHHHHHHHHH-SSSHHHHHHHHHHHHHH | aaaaaaaaaaxaaaaaaaaaaaaaaaaa |
1lh0_A_1184 | 1lh0 | A | 1184 | 1211 | LKDLIAYLEEKPDMAEHLAAVRAYREEF | HHHHHHHHHH-GGGHHHHHHHHHHHHHH | aaaaaaaaaaxaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dl2_A_84 | 1dl2 | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 93 |
1dl2_A_84 | 1dl2 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 96 |
1dl2_A_84 | 1dl2 | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 97 |
1dl2_A_84 | 1dl2 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 117 |
Clusters included in this Subclass |
CLUSTER: HH.3.268 |