Information on SUBCLASS 1.2.3 |
Subclass Accession number: 4421
Subclass: 1.2.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 28 Average sequence ID (%) : 12.3 +/- 14.8 Average RMSD (Å) : 0.607 +/- 0.125 Consensus geometry
|
Consensus Sequence: | XXpXX |
(φψ)-conformation: | aabaa |
Pattern: | [adegknqrs] | x | [afgilvy] | x | [aeknqrst] | [dhnrsty] | x | [adegnpqst] | x | x | [adegkst] |
Conservation: | -0.362 | -0.938 | 1.072 | -0.579 | 1.284 | 1.536 | 0.402 | -0.392 | -1.302 | -1.143 | 0.422 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8i_*_777 | 1a8i | - | 788 | 798 | SALYKNPREWT | HHHHT-HHHHH | aaaaabaaaaa |
1e6y_A_1387 | 1e6y | A | 1403 | 1413 | ETYEKFPTALE | HHHHH-HHHHH | aaaaabaaaaa |
1fsl_A_5 | 1fsl | A | 16 | 26 | EAFKANIPQYS | HHHHH-HHHHH | aaaaabaaaaa |
1fxx_A_327 | 1fxx | A | 335 | 345 | KILRENPQVRE | HHHHH-THHHH | aaaaabaaaaa |
1gcv_A_4 | 1gcv | A | 15 | 25 | QVLAKSPEAYG | HHHHH-HHHHH | aaaaabaaaaa |
1gjn_A_4 | 1gjn | A | 15 | 25 | GKVEADIAGHG | HHHHTTHHHHH | aaaaabaaaaa |
1hbn_A_367 | 1hbn | A | 383 | 393 | EQYEEYPALLE | HHHHH-HHHHH | aaaaabaaaaa |
1hna_*_171 | 1hna | - | 172 | 182 | SCLDAFPNLKD | HHHHT-HHHHH | aaaaabaaaaa |
1hrd_A_33 | 1hrd | A | 34 | 44 | PVVDAHPEYEE | HHHHT-HHHHH | aaaaabaaaaa |
1jdr_A_242 | 1jdr | A | 249 | 259 | KEYANDQDKFF | HHHHT-HHHHH | aaaaabaaaaa |
1ju3_A_185 | 1ju3 | A | 193 | 203 | AAILNDVAGAA | HHHHH-HHHHH | aaaaabaaaaa |
1kic_A_185 | 1kic | A | 185 | 195 | WNIYWDPASAK | HHHHH-HHHHH | aaaaabaaaaa |
1m15_A_288 | 1m15 | A | 288 | 298 | PKLAKDRKVLE | HHHHHSHHHHH | aaaaabaaaaa |
1mba_*_4 | 1mba | - | 15 | 25 | APVFANKNANG | HHHHHTHHHHH | aaaaabaaaaa |
1msw_D_670 | 1msw | D | 684 | 694 | SVSVTVVAAVE | HHHHH-HHHHH | aaaaabaaaaa |
1mwc_A_4 | 1mwc | A | 15 | 25 | GKVEADVAGHG | HHHHTTHHHHH | aaaaabaaaaa |
1oe8_A_183 | 1oe8 | A | 191 | 201 | NLLASSPRLAK | HHHHH-HHHHH | aaaaabaaaaa |
1on2_A_107 | 1on2 | A | 118 | 128 | QYFEEDDARKK | HHHHT-HHHHH | aaaaabaaaaa |
1q5d_A_257 | 1q5d | A | 268 | 278 | LNLLRSPEALE | HHHHH-HHHHH | aaaaabaaaaa |
1qgr_A_832 | 1qgr | A | 835 | 845 | KLVEARPMIHE | HHHHTSHHHHH | aaaaabaaaaa |
1r7i_A_135 | 1r7i | A | 141 | 151 | LANRKDQLLNS | HHHHHTHHHHH | aaaaabaaaaa |
1ri5_A_250 | 1ri5 | A | 256 | 266 | DEGRRNPELSK | HHHHT-HHHHH | aaaaabaaaaa |
1vj5_A_390 | 1vj5 | A | 393 | 403 | AELEQNLSRTF | HHHHHTHHHHH | aaaaabaaaaa |
1vk3_A_408 | 1vk3 | A | 409 | 419 | DLALQDTYWGT | HHHTT-HHHHH | aaaaabaaaaa |
2gdm_*_5 | 2gdm | - | 16 | 26 | EEFNANIPKHT | HHHHTTHHHHH | aaaaabaaaaa |
2lhb_*_13 | 2lhb | - | 24 | 34 | APVYSTYETSG | HHHHHTHHHHH | aaaaabaaaaa |
5csm_A_161 | 5csm | A | 167 | 177 | AKFQSDIPLYT | HHHHT-HHHHH | aaaaabaaaaa |
5rub_A_431 | 5rub | A | 435 | 445 | RAFESFPGDAD | HHHHHSHHHHH | aaaaabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.0.24 |
CLUSTER: HH.1.30 |
CLUSTER: HH.1.66 |
CLUSTER: HH.2.235 |
CLUSTER: HH.2.53 |
CLUSTER: HH.3.64 |