Information on SUBCLASS 1.2.8 |
Subclass Accession number: 4426
Subclass: 1.2.8 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 16 Average sequence ID (%) : 19.3 +/- 22.6 Average RMSD (Å) : 0.513 +/- 0.154 Consensus geometry
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Consensus Sequence: | pXpPp |
(φψ)-conformation: | aabaa |
Pattern: | x | x | [aclpw] | [adegnqt] | [afglvy] | [acflvw] | x | x | x | [lp] | [aegks] | x | [aiklmt] | [dehprt] | [adeknqr] | [AGILVWY] | [aclmtv] |
Conservation: | -0.530 | -0.419 | -0.562 | -0.062 | -0.722 | -0.666 | -0.111 | -0.620 | -0.213 | 3.577 | 0.880 | -0.478 | -0.046 | 0.057 | -0.101 | -0.035 | 0.052 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b79_A_29 | 1b79 | A | 35 | 51 | SVLGGLMLDNERWDDVA | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1cb8_A_302 | 1cb8 | A | 304 | 320 | RLLVAKMIDLKHTEEWA | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1cpt_*_287 | 1cpt | - | 288 | 304 | EQLALAKSDPALIPRLV | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1dgf_A_179 | 1dgf | A | 181 | 197 | MVWDFWSLRPESLHQVS | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1dz4_A_268 | 1dz4 | A | 269 | 285 | EHRQELIQRPERIPAAC | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1e93_A_158 | 1e93 | A | 160 | 176 | YKWDFFSHLPESLHQLT | HHHHHHHT-GGGHHHHH | aaaaaaaabaaaaaaaa |
1eup_A_261 | 1eup | A | 262 | 278 | DQLALVRADPSALPNAV | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1gwe_A_164 | 1gwe | A | 166 | 182 | MQWDFWTNNPESAHQVT | HHHHHHHT-GGGHHHHH | aaaaaaaabwaaaaaaa |
1h6k_A_61 | 1h6k | A | 71 | 87 | LLCTVARLLPEKLTIYT | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1n40_A_253 | 1n40 | A | 254 | 270 | QLRNLLHEKPELIPAGV | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1oyz_A_105 | 1oyz | A | 114 | 130 | STAQRCKKNPIYSPKIV | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1p80_A_237 | 1p80 | A | 238 | 254 | TFWDYVSLQPETLHNVM | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1q5d_A_274 | 1q5d | A | 275 | 291 | EALELVKAEPGLMRNAL | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1qwl_A_160 | 1qwl | A | 162 | 178 | MVWDFWSNVPESLYQVT | HHHHHHHH-GGGHHHHH | aaaaaaaabaaaaaaaa |
1si8_A_158 | 1si8 | A | 160 | 176 | AVWDFWSHSPESLHQVT | HHHHHHHT-GGGHHHHH | aaaaaaaabaaaaaaaa |
1vlk_*_76 | 1vlk | - | 76 | 92 | VMPQAENQDPEAKDHVN | HHHHHHHH-TTTHHHHH | aaaaaaaabaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.3.135 |
CLUSTER: HH.3.93 |
CLUSTER: HH.5.18 |