Information on SUBCLASS 1.2.13 |
Subclass Accession number: 4431
Subclass: 1.2.13 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 18.2 +/- 21.8 Average RMSD (Å) : 0.400 +/- 0.183 Consensus geometry
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Consensus Sequence: | XXpPp |
(φψ)-conformation: | aabaa |
Pattern: | [aflv] | [fikt] | x | x | [alw] | [aiw] | [adkn] | [DEHN] | [HP] | [DENS] | x | x | [alpv] | [adnqt] | [AFLY] | [ailv] |
Conservation: | -0.291 | -0.779 | -0.723 | -0.106 | -0.361 | -0.647 | -0.562 | 1.399 | 2.956 | 0.938 | -0.656 | -0.199 | -0.474 | -0.682 | 0.372 | -0.185 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fx2_A_910 | 1fx2 | A | 910 | 925 | STALWAAHPDLMPDAV | HHHHHHH-TTTHHHHH | aaaaaaabaaaaaaaa |
1hu3_A_785 | 1hu3 | A | 795 | 810 | VFEKAIDEPSFSVAYA | HHHHHHH-GGGHHHHH | aaaaaaabaaaaaaaa |
1hw1_A_83 | 1hw1 | A | 83 | 98 | LETLARLDHESVPQLI | HHHHHHH-GGGHHHHH | aaaaaaabaaaaaaaa |
1lp1_A_24 | 1lp1 | A | 30 | 45 | FIFSLWDDPSQSANLL | HHHHHHH-GGGHHHHH | aaaaaaabaaaaaaaa |
1lp1_B_24 | 1lp1 | B | 30 | 45 | FIQSLKDDPSQSANLL | HHHHHHH-TTSHHHHH | aaaaaaabaaaaaaaa |
1psz_A_144 | 1psz | A | 155 | 170 | AKQLSAKDPNNKEFYE | HHHHHHH-GGGHHHHH | aaaaaaabaaaaaaaa |
1qsa_A_185 | 1qsa | A | 190 | 205 | AIISLANNPNTVLTFA | HHHHHHH-GGGHHHHH | aaaaaaabaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hu3_A_785 | 1hu3 | A | MSESELENOMETHIONINE | V - 791 |
1hu3_A_785 | 1hu3 | A | MSESELENOMETHIONINE | V - 795 |
1hu3_A_785 | 1hu3 | A | MSESELENOMETHIONINE | V - 807 |
1hu3_A_785 | 1hu3 | A | MSESELENOMETHIONINE | A - 808 |
1hu3_A_785 | 1hu3 | A | MSESELENOMETHIONINE | Y - 809 |
1hu3_A_785 | 1hu3 | A | MSESELENOMETHIONINE | A - 810 |
1lp1_B_24 | 1lp1 | B | MGMAGNESIUM ION | E - 24 |
1lp1_B_24 | 1lp1 | B | MGMAGNESIUM ION | E - 25 |
1qsa_A_185 | 1qsa | A | GOLGLYCEROL | I - 187 |
Clusters included in this Subclass |
CLUSTER: HH.4.90 |