Information on SUBCLASS 7.6.1 |
Subclass Accession number: 444
Subclass: 7.6.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.2 (>75 %) 1.2.1 (>75 %) 1.2.1.12 GO : GO:0008943 (>50 %) GO:0016620 (>50 %) GO:0016903 (>50 %) SCOP : 55346 (>75 %) 55347 (>75 %) 55348 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 1.5 +/- 3.2 Average RMSD (Å) : 1.033 +/- 0.252 Consensus geometry
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Consensus Sequence: | XXXXXXXXXXX |
(φψ)-conformation: | aagbpaappbb |
Pattern: | [AGR] | [EQT] | x | [HLY] | [FR] | [ALT] | [AIL] | x | x | x | x | x | x | [PRS] | x | [AES] | [DGT] | [APS] | [FHL] | [FTV] | [AFL] | x |
Conservation: | -0.228 | 1.441 | -0.228 | 1.441 | 1.169 | -0.228 | 0.607 | -1.062 | 0.050 | -1.062 | -1.340 | 2.275 | -0.784 | -0.506 | -1.062 | 0.885 | -0.228 | 0.885 | 0.050 | -0.228 | -0.506 | -1.340 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1afw_A_100 | 1afw | A | 100 | 121 | ATEHRAACLASGIPYSTPFVAL | HHHHHHHHHHTT--TTS-EEEE | aaaaaaaaaaagxwaaxxbbbb |
1gnu_A_57 | 1gnu | A | 58 | 79 | GQFYFLIRKRIHLRAEDALFFF | HHHHHHHHHHTT--TTS--EEE | aaaaaaaaaaavbxaabxbbxb |
1k5n_A_57 | 1k5n | A | 75 | 96 | REDLRTLLRYYNQSEAGSHTLQ | HHHHHHHHHHTT--SSS--EEE | aaaaaaaaaaalbxaaxxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1afw_A_100 | 1afw | A | MPD2-METHYL-2,4-PENTANEDIOL | T - 101 |
1gnu_A_57 | 1gnu | A | NINICKEL (II) ION | K - 66 |
1gnu_A_57 | 1gnu | A | NINICKEL (II) ION | R - 67 |
1gnu_A_57 | 1gnu | A | NINICKEL (II) ION | H - 69 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gnu_A_57 | 1gnu | A | NINI BINDING SITE FOR CHAIN A | H - 69 |
Clusters included in this Subclass |
CLUSTER: HE.9.13 |