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Information on SUBCLASS 1.2.34
Subclass Accession number: 4452
Subclass: 1.2.34 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 16.7 +/- 15.8
Average RMSD (Å) : 0.400 +/- 0.173

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXXp
(φψ)-conformation: aabaa
Pattern: [KV][ER][EWY]x[AQ][PR][KRY]xx[AKL][AIW]x
Conservation:-0.1021.5330.523-1.0750.9001.465-0.010-0.102-1.342-1.075-1.0750.361
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e1o_A_1641e1o   A164175VRYRQRYLDLIAHHHHTHHHHHHHaaaabaaaaaaa
1oyj_A_1871oyj   A187198VEEVAPRLAAWAHHHH-HHHHHHHaaaabaaaaaaa
1uyr_A_14901uyr   A14901501KEWLQPKRYKAHHHHHSHHHHHHHaaaabaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oyj_A_1871oyj   A     GOLGLYCEROL V - 187
1oyj_A_1871oyj   A     GOLGLYCEROL E - 188
1oyj_A_1871oyj   A     MGMAGNESIUM ION E - 189
1oyj_A_1871oyj   A     MGMAGNESIUM ION V - 190
1oyj_A_1871oyj   A     MGMAGNESIUM ION P - 192
1oyj_A_1871oyj   A     MGMAGNESIUM ION R - 193
1oyj_A_1871oyj   A     GOLGLYCEROL L - 194
1oyj_A_1871oyj   A     GOLGLYCEROL A - 195
1oyj_A_1871oyj   A     GOLGLYCEROL A - 196
1oyj_A_1871oyj   A     GOLGLYCEROL A - 198
1oyj_A_1871oyj   A     GOLGLYCEROL R - 199

Clusters included in this Subclass
CLUSTER: HH.2.153