Information on SUBCLASS 7.8.1 |
Subclass Accession number: 446
Subclass: 7.8.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>75 %) 3.1 (>75 %) 3.1.1 (>75 %) 3.1.1 (>75 %) 3.1.1.33.1.1.3 (>75 %) GO : GO:0016298 (>50 %) GO:0016298 (>75 %) GO:0016788 (>75 %) GO:0016788 (>75 %) GO:0016789 (>75 %) GO:0016789 (>75 %) SCOP : 53473 (>75 %) 53473 (>75 %) 53474 (>75 %) 53474 (>75 %) 53558 (>50 %) 53558 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 12.0 +/- 13.5 Average RMSD (Å) : 1.533 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXXpphXpXXX |
(φψ)-conformation: | aalpppappbb |
Pattern: | [NPS] | x | [NV] | [CKT] | [GIL] | x | [IK] | x | [ALM] | x | [EK] | [EGQ] | [ALT] | [GQ] | [KY] | [ES] | [ILV] | [DGR] | [EKS] | [DGV] | [FR] | x | [IL] | x | x |
Conservation: | 0.003 | -0.880 | -0.441 | -0.502 | -1.385 | -0.123 | -0.181 | 0.330 | 0.003 | -1.006 | 1.996 | -0.123 | -0.502 | 0.889 | 1.365 | 1.308 | 1.390 | -0.754 | 0.381 | -1.385 | 0.516 | -0.628 | 1.868 | -0.880 | -1.259 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e4f_T_53 | 1e4f | T | 59 | 83 | SVNTLLKELEEQLQKSLRSDFVISF | HHHHHHHHHHHHHTS---S-EEEEE | aaaaaaaaaaaaalbxbaxxxbbbb |
1pie_A_101 | 1pie | A | 102 | 126 | NYVKGMIVMLKGAGYEIDKGFELLI | HHHHHHHHHHHHTT----S-EEEEE | aaaaaaaaaaaaavxbxabxbbbbb |
1viu_A_93 | 1viu | A | 93 | 117 | PEVCIRKEAIEETGYEVGEVRKLFE | HHHHHHHHHHHHHS------EEEEE | aaaaaaaaaaaaavxxxFxbbxaeb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1viu_A_93 | 1viu | A | MSESELENOMETHIONINE | L - 118 |
Clusters included in this Subclass |
CLUSTER: HE.8.21 |