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PDB code:

Information on SUBCLASS 1.3.4

Subclass Accession number: 4465 Subclass: 1.3.4 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 30 Average sequence ID (%) : 13.9 +/- 15.7 Average RMSD (Å) : 0.520 +/- 0.194 Consensus geometry d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ee4_A_123	1ee4	A	123	135	IDVVIQAGVVPRL	HHHHHHTT-HHHH	aaaaaaavaaaaa
1ee4_A_205	1ee4	A	208	220	RDYVLQCNAMEPI	HHHHHHTT-HHHH	aaaaaaavaaaaa
1ee4_A_331	1ee4	A	334	346	TQVVINAGVLPAL	HHHHHHTTHHHHH	aaaaaaavaaaaa
1ee4_A_373	1ee4	A	376	388	IQAVIDANLIPPL	HHHHHHTT-HHHH	aaaaaaalaaaaa
1ee4_A_418	1ee4	A	421	433	IRYLVSQGCIKPL	HHHHHHTT-HHHH	aaaaaaavaaaaa
1g3j_C_225	1g3j	C	228	240	LLAIFKSGGIPAL	HHHHHHTT-HHHH	aaaaaaavaaaaa
1iat_A_61	1iat	A	68	80	VDLAKSRGVEAAR	HHHHHHTTHHHHH	aaaaaaavaaaaa
1io7_A_211	1io7	A	222	234	VIDFTRFNLWQRI	HHHHHHTT-HHHH	aaaaaaalaaaaa
1jdh_A_478	1jdh	A	482	494	QNAVRLHYGLPVV	HHHHHHTT-HHHH	aaaaaaalaaaaa
1jdh_A_584	1jdh	A	587	599	RIVIRGLNTIPLF	HHHHHHTT-HHHH	aaaaaaalaaaaa
1jdh_A_625	1jdh	A	628	640	AEAIEAEGATAPL	HHHHHHTT-HHHH	aaaaaaavaaaaa
1jvn_A_53	1jvn	A	57	69	VDNLFNRGFEKPI	HHHHHHTT-HHHH	aaaaaaavaaaaa
1k9v_F_354	1k9v	F	358	370	MRRLRENDLIDFV	HHHHHHTT-HHHH	aaaaaaalaaaaa
1knz_A_39	1knz	A	51	63	DFVMDDSGVKNNP	HHHHHHTSTTHHH	aaaaaaavaaaaa
1l3a_A_224	1l3a	A	236	248	FVMPYLLGWHTAV	HHHHHHTTHHHHH	aaaaaaavaaaaa
1ld9_A_140	1ld9	A	144	156	RRKWEQAGAAEYY	HHHHHHTTSHHHH	aaaaaaavaaaaa
1mhc_A_138	1mhc	A	144	156	KSRLESAGTAEYF	HHHHHHH-THHHH	aaaaaaavaaaaa
1mum_A_270	1mum	A	271	283	NELYESINYYQYE	HHHHHHTTTHHHH	aaaaaaalaaaaa
1nrj_A_96	1nrj	A	110	122	LKLWNSLHLSESI	HHHHHHTTHHHHH	aaaaaaalaaaaa
1ohw_A_358	1ohw	A	368	380	INIIKREDLLSNA	HHHHHHTTHHHHH	aaaaaaalaaaaa
1q1s_C_112	1q1s	C	112	124	IDNIIRAGLIPKF	HHHHHHTT-HHHH	aaaaaaavaaaaa
1q1s_C_152	1q1s	C	155	167	TKAVVDGGAIPAF	HHHHHHTTHHHHH	aaaaaaavaaaaa
1q1s_C_194	1q1s	C	197	209	RDLVIKHGAIDPL	HHHHHHTT-HHHH	aaaaaaavaaaaa
1q1s_C_367	1q1s	C	370	382	IQQVVNHGLVPFL	HHHHHHTT-HHHH	aaaaaaavaaaaa
1q1s_C_410	1q1s	C	413	425	IVYLVHCGIIEPL	HHHHHHTT-HHHH	aaaaaaavaaaaa
1q1s_C_457	1q1s	C	461	473	SIMIEECGGLDKI	HHHHHHTTSHHHH	aaaaaaavaaaaa
1r0w_A_514	1r0w	A	518	530	KSVVKACQLQQDI	HHHHHHTT-HHHH	aaaaaaavaaaaa
1s0a_A_314	1s0a	A	323	335	SLAILESGDWQQQ	HHHHHHT-HHHHH	aaaaaaavaaaaa
2dkb_*_308	2dkb	-	318	330	LDVVQRDGLVARA	HHHHHHTTHHHHH	aaaaaaavaaaaa
2oat_A_327	2oat	A	337	349	LEVLEEENLAENA	HHHHHHTTHHHHH	aaaaaaalaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1io7_A_211	1io7	A	HEMPROTOPORPHYRIN IX CONTAINING FE	N - 211
1io7_A_211	1io7	A	HEMPROTOPORPHYRIN IX CONTAINING FE	T - 213
1io7_A_211	1io7	A	HEMPROTOPORPHYRIN IX CONTAINING FE	T - 214
1io7_A_211	1io7	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 217
1jvn_A_53	1jvn	A	143S-2,3-DIHYDRO-5-GLYCIN-2-YL-ISOXAZOL-3-YL-CYSTEINE	Y - 53
1jvn_A_53	1jvn	A	NINICKEL (II) ION	Y - 53

Clusters included in this Subclass

CLUSTER: HH.2.31

CLUSTER: HH.3.55

CLUSTER: HH.4.26

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