Information on SUBCLASS 1.3.5 |
Subclass Accession number: 4466
Subclass: 1.3.5 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 26 Average sequence ID (%) : 10.7 +/- 14.3 Average RMSD (Å) : 0.512 +/- 0.190 Consensus geometry
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Consensus Sequence: | XXXhX |
(φψ)-conformation: | aalaa |
Pattern: | x | x | [afilmpvw] | x | x | x | [degnqr] | [afgilvwy] | x | [adeknqst] | x |
Conservation: | 0.621 | -0.219 | -0.760 | -0.725 | -0.671 | -0.579 | 1.632 | 0.935 | -1.195 | 1.541 | -0.580 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d3y_A_199 | 1d3y | A | 203 | 213 | ARLNAERFWDK | HHHHHTTHHHH | aaaaaalaaaa |
1dpe_*_113 | 1dpe | - | 113 | 123 | EYFEGMGLPEL | HHHHHTTHHHH | aaaaaavaaaa |
1ee4_A_331 | 1ee4 | A | 335 | 345 | QVVINAGVLPA | HHHHHTTHHHH | aaaaaavaaaa |
1ejx_C_1494 | 1ejx | C | 1494 | 1504 | QAAAANGVAER | HHHHHTTHHHH | aaaaaavaaaa |
1f0j_A_191 | 1f0j | A | 198 | 208 | AIFQERDLLKT | HHHHHTTHHHH | aaaaaalaaaa |
1ffv_B_440 | 1ffv | B | 446 | 456 | KVLDAVDYPAL | HHHHHHTHHHH | aaaaaalaaaa |
1fp2_A_27 | 1fp2 | A | 34 | 44 | KWAVEMNIPNI | HHHHHTTHHHH | aaaaaavaaaa |
1gqe_A_6 | 1gqe | A | 20 | 30 | VLRGYLDYDAK | HHHHHTTHHHH | aaaaaalaaaa |
1gso_A_73 | 1gso | A | 73 | 83 | EAPLVKGVVDT | HHHHHTTHHHH | aaaaaavaaaa |
1ih7_A_312 | 1ih7 | A | 333 | 343 | QIDAKRQFINL | HHHHHH-HHHH | aaaaaalaaaa |
1jmx_A_423 | 1jmx | A | 423 | 433 | ERAVEDEDVKF | HHHHHTTHHHH | aaaaaalaaaa |
1kfi_A_542 | 1kfi | A | 552 | 562 | LGLEISDIAQF | HHHHHH-HHHH | aaaaaalaaaa |
1kiy_A_177 | 1kiy | A | 181 | 191 | LRRMNGLGHCV | HHHHHH-HHHH | aaaaaavaaaa |
1l3a_A_224 | 1l3a | A | 237 | 247 | VMPYLLGWHTA | HHHHHTTHHHH | aaaaaavaaaa |
1l3a_C_224 | 1l3a | C | 237 | 247 | VMPYLLGWHTA | HHHHHHTHHHH | aaaaaavaaaa |
1lw3_A_525 | 1lw3 | A | 526 | 536 | QQRGKENLPKR | HHHHHTTHHHH | aaaaaalaaaa |
1mhc_A_138 | 1mhc | A | 145 | 155 | SRLESAGTAEY | HHHHHH-THHH | aaaaaavaaaa |
1mnz_A_324 | 1mnz | A | 328 | 338 | EALRASRLDEL | HHHHHTTHHHH | aaaaaavaaaa |
1nrj_A_96 | 1nrj | A | 111 | 121 | KLWNSLHLSES | HHHHHTTHHHH | aaaaaalaaaa |
1ohw_A_358 | 1ohw | A | 369 | 379 | NIIKREDLLSN | HHHHHTTHHHH | aaaaaalaaaa |
1q1s_C_152 | 1q1s | C | 156 | 166 | KAVVDGGAIPA | HHHHHTTHHHH | aaaaaavaaaa |
1so2_A_695 | 1so2 | A | 702 | 712 | TLFQDTGLLEI | HHHHHTTHHHH | aaaaaavaaaa |
2cev_A_23 | 2cev | A | 25 | 35 | SAMRYAGVIER | HHHHHTTHHHH | aaaaaavaaaa |
2dkb_*_308 | 2dkb | - | 319 | 329 | DVVQRDGLVAR | HHHHHTTHHHH | aaaaaavaaaa |
2oat_A_327 | 2oat | A | 338 | 348 | EVLEEENLAEN | HHHHHTTHHHH | aaaaaalaaaa |
3pmg_A_531 | 3pmg | A | 541 | 551 | IALKVSQLQER | HHHHHHTHHHH | aaaaaalaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dpe_*_113 | 1dpe | * | CDCADMIUM ION | E - 116 |
1f0j_A_191 | 1f0j | A | ARSARSENIC | T - 193 |
1f0j_A_191 | 1f0j | A | ARSARSENIC | C - 194 |
1f0j_A_191 | 1f0j | A | ARSARSENIC | I - 195 |
1f0j_A_191 | 1f0j | A | ARSARSENIC | Y - 197 |
1f0j_A_191 | 1f0j | A | ARSARSENIC | A - 198 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | L - 14 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | S - 18 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | R - 22 |
1gqe_A_6 | 1gqe | A | MSESELENOMETHIONINE | Y - 24 |
1kiy_A_177 | 1kiy | A | EDO1,2-ETHANEDIOL | G - 186 |
1kiy_A_177 | 1kiy | A | EDO1,2-ETHANEDIOL | L - 187 |
1kiy_A_177 | 1kiy | A | EDO1,2-ETHANEDIOL | V - 191 |
Clusters included in this Subclass |
CLUSTER: HH.1.117 |
CLUSTER: HH.1.25 |
CLUSTER: HH.2.80 |
CLUSTER: HH.3.164 |
CLUSTER: HH.3.196 |