Information on SUBCLASS 1.3.15 |
Subclass Accession number: 4476
Subclass: 1.3.15 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 5.6 +/- 6.5 Average RMSD (Å) : 0.567 +/- 0.153 Consensus geometry
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Consensus Sequence: | ppXXh |
(φψ)-conformation: | aalaa |
Pattern: | x | [GLP] | [AIL] | [RSY] | [LVY] | [FKL] | x | [DT] | [EFL] | [AFL] | x | [DQS] | [ENR] | x | x | [AIL] | x | x | [L] | x | [FWY] | x | [FLM] | x |
Conservation: | -0.204 | -1.229 | 0.103 | -0.512 | 0.206 | -0.614 | -0.307 | 1.116 | -0.819 | -0.307 | -0.819 | 0.410 | 0.513 | 0.718 | -0.614 | 0.103 | -0.512 | -0.614 | 2.563 | -0.922 | 2.563 | -0.819 | 0.820 | -0.819 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dk8_A_133 | 1dk8 | A | 134 | 157 | DGISLFRTFLKQEGCADLLDFWFA | HHHHHHHHHHHTTT-HHHHHHHHH | aaaaaaaaaaaaavaaaaaaaaaa |
1mxg_A_245 | 1mxg | A | 245 | 268 | FPLYYKMDEAFDNNNIPALVYALQ | HHHHHHHHHHHTTT-HHHHHHHHH | aaaaaaaaaaaaalaaaaaaaaaa |
1nf1_A_1236 | 1nf1 | A | 1238 | 1261 | ELARVLVTLFDSRHLLYQLLWNMF | HHHHHHHHHHHTTT-HHHHHHHHH | aaaaaaaaaaaaavaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mxg_A_245 | 1mxg | A | MGMAGNESIUM ION | D - 252 |
1mxg_A_245 | 1mxg | A | MGMAGNESIUM ION | D - 256 |
1mxg_A_245 | 1mxg | A | MGMAGNESIUM ION | N - 257 |
Clusters included in this Subclass |
CLUSTER: HH.5.308 |