Logo
Information on SUBCLASS 1.3.19
Subclass Accession number: 4480
Subclass: 1.3.19 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 16.7 +/- 16.9
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XhGhX
(φψ)-conformation: aalaa
Pattern: [ITV][GKR][EGN]x[LV][EL][AEN][AL][G][GVW]x[EQS]x[LV]
Conservation:0.163-0.211-0.136-0.8850.649-0.509-0.4360.0262.932-0.735-0.7350.238-1.0340.672
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1l5w_A_741l5w   A7487TGNNLLNLGWYQDVHHHHHHHHT-HHHHaaaaaaaavaaaaa
1l8w_D_1611l8w   D171184IKEIVEAAGGSEKLHHHHHHTTT-HHHHaaaaaaaavaaaaa
1oe4_A_2621oe4   A266279VRGQLLELGVLSLLHHHHHHHHT-HHHHaaaaaaaavaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1l8w_D_1611l8w   D     MSESELENOMETHIONINE S - 163
1l8w_D_1611l8w   D     MSESELENOMETHIONINE I - 167
1l8w_D_1611l8w   D     MSESELENOMETHIONINE I - 171

Clusters included in this Subclass
CLUSTER: HH.3.248