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Information on SUBCLASS 1.4.2
Subclass Accession number: 4485
Subclass: 1.4.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 17.3 +/- 16.2
Average RMSD (Å) : 0.500 +/- 0.235

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: pXGhX
(φψ)-conformation: aaeaa
Pattern: x[DEK][DKQRS]x[G]xxxxx[fkwy]
Conservation:-0.8010.8320.016-0.1752.701-0.523-0.540-0.521-0.118-0.672-0.199
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dmt_A_1451dmt   A148158IDSRGGEPLLKHHHTTTHHHHHaaaaeaaaaaa
1fhj_A_41fhj   A1424WDKIGGHAGDYHHHHGGGHHHHaaaaeaaaaaa
1jey_A_5111jey   A515525NKRLGSLVDEFHHHHTTHHHHHaaaaeaaaaaa
1nf9_A_841nf9   A8494EEQRGLLKDFWHHHHTTHHHHHaaaaeaaaaaa
1qdl_B_611qdl   B6171REDIGVSLDVIHHHHTTHHHHHaaaaeaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dmt_A_1451dmt   A     NAGN-ACETYL-D-GLUCOSAMINE S - 146
1dmt_A_1451dmt   A     NAGN-ACETYL-D-GLUCOSAMINE A - 147
1dmt_A_1451dmt   A     NAGN-ACETYL-D-GLUCOSAMINE R - 151
1fhj_A_41fhj   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 33
1nf9_A_841nf9   A     FMTFORMIC ACID R - 87
1nf9_A_841nf9   A     FMTFORMIC ACID L - 90
1nf9_A_841nf9   A     FMTFORMIC ACID W - 94

Clusters included in this Subclass
CLUSTER: HH.2.143
CLUSTER: HH.3.128