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Information on SUBCLASS 1.7.1
Subclass Accession number: 4497
Subclass: 1.7.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 17.5 +/- 16.1
Average RMSD (Å) : 0.220 +/- 0.045

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 0-45 rho (°): 180-225
Consensus Sequence: hpGhh
(φψ)-conformation: aaFaa
Pattern: [ASV]x[acfy][ILVY][ntv][G][kp][AILM][AKST][dekq]x[AILT]
Conservation:-0.042-0.689-0.8410.188-0.3922.9630.2210.070-0.040-0.511-0.689-0.239
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a99_A_2031a99   A203214ADDYTGPATDLLHHHHHTHHHHHHaaaaaFaaaaaa
1e9i_A_641e9i   A6778VAAVNGPIAQALHHHHHTHHHHHHaaaaaFaaaaaa
1eer_A_1381eer   A146157SNFLRGKLKLYTHHHHHTHHHHHHaaaaaFaaaaaa
1h2s_A_1221h2s   A138149VYYLVGPMTESAHHHHHTHHHHHHaaaaaFaaaaaa
1qmg_A_3531qmg   A353364VECITGVISKTIHHHHHTHHHHHHaaaaaFaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h2s_A_1221h2s   A     RETRETINAL L - 126
1h2s_A_1221h2s   A     RETRETINAL F - 127
1h2s_A_1221h2s   A     RETRETINAL G - 130
1h2s_A_1221h2s   A     RETRETINAL A - 131
1h2s_A_1221h2s   A     RETRETINAL F - 134

Clusters included in this Subclass
CLUSTER: HH.0.39