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Information on SUBCLASS 1.8.1
Subclass Accession number: 4498
Subclass: 1.8.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 35.2 +/- 21.6
Average RMSD (Å) : 0.225 +/- 0.050

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: pphAp
(φψ)-conformation: aa_aa
Pattern: [FIL]x[DEKQ][DER][FLY][A]x[P][FLV][P]xx[IV][FI][CGMY]x[L][ALM]
Conservation:-0.169-0.851-0.230-0.1810.0980.777-0.8702.240-0.3702.240-0.448-0.9010.5330.022-1.145-1.1140.777-0.408
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dz4_A_1501dz4   A150167FTEDYAEPFPIRIFMLLAHHHHTTTHHHHHHHHHHHaaaaNaaaaaaaaaaaaa
1eup_A_1401eup   A140157IVDRFAHPLPIKVICELLHHHHTTTHHHHHHHHHHHaaaaIaaaaaaaaaaaaa
1jfb_A_1401jfb   A140157LVKEFALPVPSYIIYTLLHHHHTTTHHHHHHHHHHHaaaaIaaaaaaaaaaaaa
1odo_A_1401odo   A140157LRQELAYPLPIAVIGHLMHHHHTTTHHHHHHHHHHHaaaaNaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dz4_A_1501dz4   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 163
1eup_A_1401eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 153
1eup_A_1401eup   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 156
1jfb_A_1401jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 149
1jfb_A_1401jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 152
1jfb_A_1401jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 157

Clusters included in this Subclass
CLUSTER: HH.3.215