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Information on SUBCLASS 2.1.3
Subclass Accession number: 4503
Subclass: 2.1.3 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 11.1 +/- 13.6
Average RMSD (Å) : 0.639 +/- 0.217

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XphpXX
(φψ)-conformation: aappaa
Pattern: xxxxx[dehknrstw][aiklmtv][deknpqst]x[adegkqrst][dehkqrt]x
Conservation:-1.328-1.305-0.314-0.291-0.7330.2431.3571.603-0.9470.4241.1100.180
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a41_*_2881a41   -289300LDVVSKTTFDEFHHHHTT--HHHHaaaaaaxxaaaa
1a4s_A_571a4s   A7182YLKWSKMAGIERHHHHTTS-HHHHaaaaaaxxaaaa
1aa7_A_1091aa7   A113124KEISLSYSAGALHHHHTTS-HHHHaaaaaabxaaaa
1b3u_A_1011b3u   A112123RAISHEHSPSDLHHHHTTS-HHHHaaaaaaxxaaaa
1cb6_A_13161cb6   A13271338AIQNLRKSEEEVHHHHTTS-HHHHaaaaaaxxaaaa
1dmt_A_3481dmt   A355366KPILTKYSARDLHHHHTTS-HHHHaaaaaabxaaaa
1eex_A_981eex   A102113VPLTTAMTPAKIHHHHTTS-HHHHaaaaaaxxaaaa
1eex_G_991eex   G108119AAELTAVPDDRIHHHHTTS-HHHHaaaaaaxxaaaa
1fwx_A_611fwx   A6576RIHERTMSERTKHHHHTT--HHHHaaaaaapxaaaa
1g71_A_2021g71   A211222GYFILRVNVPHLHHHHTT--HHHHaaaaaapbaaaa
1i2t_A_10291i2t   A10331044TGMLLELSPAQLHHHHTTS-HHHHaaaaaaxxaaaa
1iex_A_121iex   A1728ADLLGRMTLAEKHHHHTT--HHHHaaaaaaxxaaaa
1j1n_A_3931j1n   A394405DYERQWTTPEAQHHHHTT--HHHHaaaaaaxxaaaa
1jm6_A_10381jm6   A10571068MKEINLLPDRVLHHHHTTS-HHHHaaaaaaxpaaaa
1m4z_A_1891m4z   A193204KAYIKKVEPREAHHHHTTS-HHHHaaaaaaxxaaaa
1nlf_A_801nlf   A8899HALGAHLSAEERHHHHTTS-HHHHaaaaaabxaaaa
1o20_A_31o20   A1526WDVLRNATTREKHHHHTT--HHHHaaaaaaxxaaaa
1p1m_A_801p1m   A8192LPIEDRLTEKMAHHHHTT--HHHHaaaaaaxxaaaa
1pmq_A_2841pmq   A284295PEFMKKLQPTVRHHHHHTS-HHHHaaaaaaxpaaaa
1q0s_A_531q0s   A5970YKRLINVSWDDVHHHHTT--HHHHaaaaaabbaaaa
1qb2_A_3651qb2   A376387MTIMDSMNDQELHHHHTTS-HHHHaaaaaaxxaaaa
1qc7_A_2461qc7   A250261QLVLREVDTRDLHHHHTSS-HHHHaaaaaabxaaaa
1qgr_A_5731qgr   A589600QNVLRKVQHQDAHHHHTTS-HHHHaaaaaaxxaaaa
1qr0_A_141qr0   A1829ERFMTFISPEKRHHHHTTS-HHHHaaaaaaxxaaaa
1rp3_A_1641rp3   A179190KEAVSKLPEREKHHHHTTS-HHHHaaaaaabxaaaa
1utg_*_321utg   -4253KKVLDSLPQTTRHHHHTTS-HHHHaaaaaaxwaaaa
1uzb_A_731uzb   A8798FKTWKDWPQEDRHHHHTTS-HHHHaaaaaaxxaaaa
1v33_A_2021v33   A211222GYFILRIKLPHLHHHHTT--HHHHaaaaaaxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j1n_A_3931j1n   A     MAW4-DEOXY-D-MANNURONIC ACID Y - 395
1j1n_A_3931j1n   A     MAVD-MANNURONIC ACID Y - 395
1j1n_A_3931j1n   A     MAW4-DEOXY-D-MANNURONIC ACID E - 396
1j1n_A_3931j1n   A     MAW4-DEOXY-D-MANNURONIC ACID W - 399
1o20_A_31o20   A     MSESELENOMETHIONINE L - 4
1o20_A_31o20   A     MSESELENOMETHIONINE A - 34
1o20_A_31o20   A     MSESELENOMETHIONINE L - 37
1p1m_A_801p1m   A     METMETHIONINE L - 81
1p1m_A_801p1m   A     METMETHIONINE E - 84
1q0s_A_531q0s   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 55
1qr0_A_141qr0   A     COACOENZYME A K - 28
1qr0_A_141qr0   A     COACOENZYME A K - 31
1uzb_A_731uzb   A     MRD(4R)-2-METHYLPENTANE-2,4-DIOL K - 91
1uzb_A_731uzb   A     MRD(4R)-2-METHYLPENTANE-2,4-DIOL D - 92

Clusters included in this Subclass
CLUSTER: HH.3.28
CLUSTER: HH.4.64