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Information on SUBCLASS 2.1.5
Subclass Accession number: 4505
Subclass: 2.1.5 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 13.9 +/- 16.1
Average RMSD (Å) : 0.606 +/- 0.182

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XphXXX
(φψ)-conformation: aappaa
Pattern: [filtv][afgkl][adegnpq]x[aglvy][adegknrst][dehkqrs][afklmt][dgpqst]xxxxx[adgknrs][ailmv]
Conservation:2.094-0.968-1.342-0.7381.302-0.6260.7970.5940.125-1.587-0.073-0.1120.111-0.266-0.4861.176
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a41_*_2881a41   -288303FLDVVSKTTFDEFLSIHHHHHTT--HHHHHHHaaaaaaaxxaaaaaaa
1a4e_A_4591a4e   A467482IGIHVEGACPQIQQRVHHHHHTTS-HHHHHHHaaaaaaaxpaaaaaaa
1b6q_*_31b6q   -2237LLEKLNELDPDEQADIHHHHHTTS-HHHHHHHaaaaaaabxaaaaaaa
1cb6_A_13161cb6   A13261341TAIQNLRKSEEEVAARHHHHHTTS-HHHHHHHaaaaaaaxxaaaaaaa
1dgf_A_4531dgf   A463478IAGHLKDAQIFIQKKAHHHHHTTS-HHHHHHHaaaaaaaxpaaaaaaa
1dmt_A_3481dmt   A354369LKPILTKYSARDLQNLHHHHHTTS-HHHHHHHaaaaaaabxaaaaaaa
1e93_A_4311e93   A441456IAGELSQASKETQQRQHHHHHTTS-HHHHHHHaaaaaaaxxaaaaaaa
1iap_A_731iap   A8095HADMLGSLGPKEAKKAHHHHHTTS-HHHHHHHaaaaaaabxaaaaaaa
1iex_A_121iex   A1631VADLLGRMTLAEKIGQHHHHHTT--HHHHHHHaaaaaaaxxaaaaaaa
1kiy_A_1261kiy   A135150FPNVLRHFGPFCSLNLHHHHHTTS-HHHHHHHaaaaaaabxaaaaaaa
1m7s_A_4501m7s   A460475FGESLADTLTESKNIMHHHHHTTS-HHHHHHHaaaaaaaxpaaaaaaa
1nlf_A_801nlf   A87102LHALGAHLSAEERQAVHHHHHTTS-HHHHHHHaaaaaaabxaaaaaaa
1qc7_B_2581qc7   B261276LALALKGASDELKEKIHHHHHTTS-HHHHHHHaaaaaaabxaaaaaaa
1rp3_A_1641rp3   A178193VKEAVSKLPEREKLVIHHHHHTTS-HHHHHHHaaaaaaabxaaaaaaa
1v9m_A_221v9m   A2439FFQEALDLSFADFLRLHHHHHTT--HHHHHHHaaaaaaabxaaaaaaa
262l_A_95262l   A95110LKPVYDSLDAVRRAALHHHHHHH--HHHHHHHaaaaaaaxbaaaaaaa
4blc_A_4524blc   A462477IAGHLKDAQLFIQKKAHHHHHTTS-HHHHHHHaaaaaaaxpaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dgf_A_4531dgf   A     ACTACETATE ION H - 466
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL P - 126
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL W - 127
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL W - 128
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL L - 130
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL V - 131
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL N - 132
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL F - 135
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL I - 151
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL T - 154
1kiy_A_1261kiy   A     EDO1,2-ETHANEDIOL L - 155
1v9m_A_221v9m   A     GOLGLYCEROL A - 34
1v9m_A_221v9m   A     GOLGLYCEROL L - 37
1v9m_A_221v9m   A     GOLGLYCEROL R - 38
1v9m_A_221v9m   A     GOLGLYCEROL L - 40
1v9m_A_221v9m   A     GOLGLYCEROL S - 41
4blc_A_4524blc   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 454

Clusters included in this Subclass
CLUSTER: HH.3.77
CLUSTER: HH.4.113
CLUSTER: HH.4.215
CLUSTER: HH.5.26