Information on SUBCLASS 2.1.25 |
Subclass Accession number: 4525
Subclass: 2.1.25 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 9.5 +/- 10.3 Average RMSD (Å) : 0.640 +/- 0.230 Consensus geometry
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Consensus Sequence: | XXhXXX |
(φψ)-conformation: | aappaa |
Pattern: | [fglt] | [EPQS] | x | x | [rsy] | [KPT] | x | [ACLV] | [AGPS] | [KPRS] | [ADEP] | x | [KRY] | [AEKR] | [efl] | [AILMY] | [DEGKR] | x | [ALY] |
Conservation: | -2.042 | 1.130 | -0.698 | -1.375 | -0.573 | 1.174 | -1.338 | 0.570 | 0.544 | 0.583 | 0.635 | -0.339 | 1.842 | 0.457 | -0.216 | 0.006 | -0.058 | -1.018 | 0.716 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b3u_A_150 | 1b3u | A | 150 | 168 | FSVCYPRVSSAVKAELRQY | HHHHTTTS-HHHHHHHHHH | aaaaaaaxpaaaaaaaaaa |
1cjc_A_231 | 1cjc | A | 231 | 249 | LQDRIKEAARPRKRLMELL | HHHHTTTS-HHHHHHHHHH | aaaaaaaxxaaaaaaaaaa |
1l3l_A_87 | 1l3l | A | 87 | 105 | GEHERPTLSKDERAFYDHA | HHHHTTT--HHHHHHHHHH | aaaaaaaxxaaaaaaaaaa |
1qj4_A_150 | 1qj4 | A | 154 | 172 | RENLYTLCGPEEYELAKML | HHHTSTTS-HHHHHHHHHH | aaaaaaaxxaaaaaaaaaa |
1r5p_A_62 | 1r5p | A | 62 | 80 | TPTLSKILPPPVRKIIGDL | HHHHGGGS-HHHHHHHHHH | aaaaaaaxpaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1l3l_A_87 | 1l3l | A | LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE | F - 101 |
1l3l_A_87 | 1l3l | A | LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE | Y - 102 |
1l3l_A_87 | 1l3l | A | LAE3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE | A - 105 |
1qj4_A_150 | 1qj4 | A | GOLGLYCEROL | L - 157 |
Clusters included in this Subclass |
CLUSTER: HH.4.196 |
CLUSTER: HH.6.267 |