Information on SUBCLASS 2.1.41 |
Subclass Accession number: 4541
Subclass: 2.1.41 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.1 +/- 10.1 Average RMSD (Å) : 0.933 +/- 0.115 Consensus geometry
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Consensus Sequence: | XpXphX |
(φψ)-conformation: | aappaa |
Pattern: | [ILW] | x | x | [HKP] | [MRY] | [FGY] | [ARS] | [NS] | x | [QST] | [AFV] | [AE] | [DGK] | [AL] |
Conservation: | 0.254 | -1.474 | -1.128 | 0.082 | -0.437 | 0.254 | -0.091 | 2.498 | -0.955 | 0.427 | -0.610 | 0.900 | -0.437 | 0.715 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dmt_A_173 | 1dmt | A | 173 | 186 | WEQKYGASWTAEKA | HHHHTTTT--HHHH | aaaaaaaaxbaaaa |
1k3x_A_136 | 1k3x | A | 143 | 156 | LLSPRFRNRQFAGL | HHSTTTTTS-HHHH | aaxaaaaaxxaaaa |
1ux5_A_1423 | 1ux5 | A | 1431 | 1444 | INLHMYSSLSVADL | HHTGGGTTS-HHHH | aaaaaaaabxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dmt_A_173 | 1dmt | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 182 |
1dmt_A_173 | 1dmt | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 184 |
1dmt_A_173 | 1dmt | A | NAGN-ACETYL-D-GLUCOSAMINE | K - 185 |
1k3x_A_136 | 1k3x | A | GOLGLYCEROL | E - 137 |
1k3x_A_136 | 1k3x | A | GOLGLYCEROL | K - 140 |
1k3x_A_136 | 1k3x | A | GOLGLYCEROL | R - 147 |
1k3x_A_136 | 1k3x | A | GOLGLYCEROL | F - 148 |
1k3x_A_136 | 1k3x | A | GOLGLYCEROL | R - 151 |
Clusters included in this Subclass |
CLUSTER: HH.7.122 |