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Information on SUBCLASS 2.1.47
Subclass Accession number: 4547
Subclass: 2.1.47 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 26.2 +/- 17.7
Average RMSD (Å) : 0.567 +/- 0.252

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXLpXX
(φψ)-conformation: aappaa
Pattern: [GVY][ANR][EKL][AI][KLT][DP][FHL][L][DS][AE][ADR][AT][R]x
Conservation:-1.091-0.617-0.854-0.110-0.8540.885-0.5381.5160.3930.129-0.9330.4622.226-0.617
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ds1_A_1771ds1   A177190VRKALPLLDERTRAHHHHGGGS-HHHHHaaaaaaaxxaaaaa
1knc_A_491knc   A5669GAEATDHLSAAARHHHHHTTT--HHHHHaaaaaaabxaaaaa
1o6u_A_1981o6u   A202215YNLIKPFLSEDTRKHHHHGGGS-HHHHHaaaaaaaxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o6u_A_1981o6u   A     MSESELENOMETHIONINE F - 198
1o6u_A_1981o6u   A     PLMPALMITIC ACID F - 198
1o6u_A_1981o6u   A     MSESELENOMETHIONINE P - 199
1o6u_A_1981o6u   A     PLMPALMITIC ACID A - 201
1o6u_A_1981o6u   A     PLMPALMITIC ACID Y - 202
1o6u_A_1981o6u   A     PLMPALMITIC ACID L - 204
1o6u_A_1981o6u   A     PLMPALMITIC ACID I - 205
1o6u_A_1981o6u   A     PLMPALMITIC ACID L - 209
1o6u_A_1981o6u   A     PLMPALMITIC ACID T - 213
1o6u_A_1981o6u   A     MSESELENOMETHIONINE R - 214
1o6u_A_1981o6u   A     MSESELENOMETHIONINE K - 215
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o6u_A_1981o6u   A AC1PLM BINDING SITE FOR CHAIN AA - 201

Clusters included in this Subclass
CLUSTER: HH.5.218