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Information on SUBCLASS 2.1.55
Subclass Accession number: 4555
Subclass: 2.1.55 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>50 %)  1.1.1 (>50 %)  
GO : GO:0016614 (>50 %)  GO:0016616 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 18.2 +/- 16.6
Average RMSD (Å) : 0.733 +/- 0.252

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXhXXp
(φψ)-conformation: aappaa
Pattern: x[AM][LTV][ADR][AN][CL][PS][ADT][DT]x[AR]
Conservation:-0.8480.602-0.260-1.4350.7250.9210.585-0.8481.391-1.4350.602
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ihu_A_2471ihu   A258268EALANLPADLAHHHHT--HHHHaaaaappaaaa
1q7c_A_1871q7c   A187197DMTRALSDDQRHHHHTS-HHHHaaaaaxxaaaa
1qmg_A_5021qmg   A512522FMVDNCSTTARHHHTTS-HHHHaaaaaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ihu_A_2471ihu   A     ADPADENOSINE-5'-DIPHOSPHATE R - 255
1q7c_A_1871q7c   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 188
1qmg_A_5021qmg   A     DMV2,3-DIHYDROXY-VALERIANIC ACID N - 516
1qmg_A_5021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE N - 516
1qmg_A_5021qmg   A     DMV2,3-DIHYDROXY-VALERIANIC ACID C - 517
1qmg_A_5021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE C - 517
1qmg_A_5021qmg   A     DMV2,3-DIHYDROXY-VALERIANIC ACID S - 518
1qmg_A_5021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE S - 518
1qmg_A_5021qmg   A     MNMANGANESE (II) ION S - 518
1qmg_A_5021qmg   A     DMV2,3-DIHYDROXY-VALERIANIC ACID T - 519
1qmg_A_5021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE T - 519
1qmg_A_5021qmg   A     DMV2,3-DIHYDROXY-VALERIANIC ACID T - 520
1qmg_A_5021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE T - 520
1qmg_A_5021qmg   A     MNMANGANESE (II) ION T - 520
1qmg_A_5021qmg   A     DMV2,3-DIHYDROXY-VALERIANIC ACID A - 521
1qmg_A_5021qmg   A     MNMANGANESE (II) ION A - 521
1qmg_A_5021qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE R - 522

Clusters included in this Subclass
CLUSTER: HH.3.252