Information on SUBCLASS 2.2.7 |
Subclass Accession number: 4568
Subclass: 2.2.7 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 17 Average sequence ID (%) : 11.3 +/- 14.0 Average RMSD (Å) : 0.565 +/- 0.240 Consensus geometry
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Consensus Sequence: | pXXXhX |
(φψ)-conformation: | aalpaa |
Pattern: | [egknqs] | [afilmw] | [acilvwy] | [DEGKQS] | [aknqrs] | [degknrs] | x | x | x | x | [acfiklv] | x |
Conservation: | 0.118 | -0.068 | -0.722 | 2.541 | 0.217 | 0.374 | 0.245 | -1.184 | -0.517 | -1.003 | 0.734 | -0.737 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cuk_*_95 | 1cuk | - | 100 | 111 | NAVEREEVGALV | HHHHTT-HHHHH | aaaaalbaaaaa |
1fch_A_583 | 1fch | A | 584 | 595 | GAADARDLSTLL | HHHHTT-HHHHH | aaaaalxaaaaa |
1g99_A_284 | 1g99 | A | 289 | 300 | EAASKGNRKAEL | HHHHTT-HHHHH | aaaaavxaaaaa |
1gyt_A_225 | 1gyt | A | 227 | 238 | QMKELGMHSYLA | HHHHTT-HHHHH | aaaaavxaaaaa |
1iib_A_81 | 1iib | A | 82 | 93 | LLYGKVDGLGVL | HHHHTT-HHHHH | aaaaalxaaaaa |
1k55_A_108 | 1k55 | A | 110 | 121 | GAIQVSAVPVFQ | HHHHTT-HHHHH | aaaaalxaaaaa |
1l5j_A_128 | 1l5j | A | 134 | 145 | EKAKAGNEYAKQ | HHHHTT-HHHHH | aaaaagxaaaaa |
1lam_*_205 | 1lam | - | 207 | 218 | WIEEQEMGSFLS | HHHHTT-HHHHH | aaaaalxaaaaa |
1mxs_A_201 | 1mxs | A | 202 | 213 | SWIKNGDWARIE | HHHHTT-HHHHH | aaaaavxaaaaa |
1nze_A_63 | 1nze | A | 64 | 75 | QFIDRKAWPSLQ | HHHHTT-HHHHH | aaaaalxaaaaa |
1o0y_A_122 | 1o0y | A | 123 | 134 | GMLKAKEWEYVY | HHHHTT-HHHHH | aaaaavxaaaaa |
1or7_A_2 | 1or7 | A | 12 | 23 | ERVQKGDQKAFN | HHHHTT-HHHHH | aaaaagxaaaaa |
1ouv_A_117 | 1ouv | A | 126 | 137 | KACDLKYAEGCA | HHHHTT-HHHHH | aaaaavxaaaaa |
1pfv_A_425 | 1pfv | A | 430 | 441 | EAWESREFGKAV | HHHHTT-HHHHH | aaaaavxaaaaa |
1ub3_A_94 | 1ub3 | A | 95 | 106 | GRAKAGDLDYLE | HHHHTT-HHHHH | aaaaavxaaaaa |
1vhc_A_189 | 1vhc | A | 190 | 201 | KLIQSNNWDEIG | HHHHTT-HHHHH | aaaaalxaaaaa |
1whi_*_105 | 1whi | - | 105 | 116 | ELRDKDFMKIIS | HHHHTT-HHHHH | aaaaavxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g99_A_284 | 1g99 | A | ADPADENOSINE-5'-DIPHOSPHATE | F - 284 |
1g99_A_284 | 1g99 | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 285 |
1g99_A_284 | 1g99 | A | ADPADENOSINE-5'-DIPHOSPHATE | D - 286 |
1g99_A_284 | 1g99 | A | ADPADENOSINE-5'-DIPHOSPHATE | D - 288 |
1k55_A_108 | 1k55 | A | KCXLYSINE NZ-CARBOXYLIC ACID | A - 111 |
1k55_A_108 | 1k55 | A | KCXLYSINE NZ-CARBOXYLIC ACID | I - 112 |
1k55_A_108 | 1k55 | A | SULSULFATE ANION | I - 112 |
1k55_A_108 | 1k55 | A | SULSULFATE ANION | Q - 113 |
1k55_A_108 | 1k55 | A | SULSULFATE ANION | V - 114 |
1k55_A_108 | 1k55 | A | KCXLYSINE NZ-CARBOXYLIC ACID | S - 115 |
1k55_A_108 | 1k55 | A | SULSULFATE ANION | S - 115 |
1k55_A_108 | 1k55 | A | KCXLYSINE NZ-CARBOXYLIC ACID | A - 116 |
1k55_A_108 | 1k55 | A | KCXLYSINE NZ-CARBOXYLIC ACID | V - 117 |
1k55_A_108 | 1k55 | A | SULSULFATE ANION | V - 117 |
1k55_A_108 | 1k55 | A | KCXLYSINE NZ-CARBOXYLIC ACID | F - 120 |
1k55_A_108 | 1k55 | A | KCXLYSINE NZ-CARBOXYLIC ACID | Q - 121 |
1k55_A_108 | 1k55 | A | SULSULFATE ANION | R - 125 |
1k55_A_108 | 1k55 | A | SULSULFATE ANION | V - 127 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.2.44 |
CLUSTER: HH.3.96 |