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Information on SUBCLASS 9.3.1
Subclass Accession number: 457
Subclass: 9.3.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.5 (>75 %)  3.5 (>75 %)  3.5.1 (>75 %)  3.5.1 (>75 %)  3.5.1.1 (>75 %)  3.5.1.1
GO : GO:0003723 (>50 %)  GO:0003724 (>50 %)  GO:0004067 (>75 %)  GO:0004067 (>75 %)  GO:0004386 (>75 %)  GO:0008026 (>75 %)  GO:0016462 (>75 %)  GO:0016810 (>75 %)  GO:0016810 (>75 %)  GO:0016811 (>75 %)  GO:0016811 (>75 %)  GO:0016817 (>75 %)  GO:0016818 (>75 %)  
SCOP : 52539 (>75 %)  52540 (>75 %)  53773 (>75 %)  53773 (>75 %)  53774 (>75 %)  53774 (>75 %)  53775 (>75 %)  53775 (>75 %)  81268 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 30.4 +/- 17.2
Average RMSD (Å) : 0.467 +/- 0.058

Consensus geometry
d (Å): 19 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: ppXXhpXpphphh
(φψ)-conformation: aalabpaaapabb
Pattern: [P][G][R][IV]x[D]x[I][KQR][EKR][GQR]x[AFL][DKR][TV][DH][HKT][AIV][HKQ][IM][FIL][IV][LV]
Conservation:2.3091.7691.2280.435-1.2331.769-1.2330.688-0.092-0.212-0.872-1.173-0.992-0.632-0.2470.150-0.872-0.512-0.3920.142-0.3920.435-0.070
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1q0u_A_1341q0u   A134156PGRINDFIREQALDVHTAHILVVHHHHHHHHHTT---GGG--EEEEaaaaaaaaaavabbaaaxabbbb
1qde_A_1461qde   A146168PGRVFDNIQRRRFRTDKIKMFILHHHHHHHHHTTSS--TT--EEEEaaaaaaaaaalabxaaaxabbbb
1vec_A_2121vec   A212234PGRILDLIKKGVAKVDHVQMIVLHHHHHHHHHTT-S--TT--EEEEaaaaaaaaaavaxxaaaxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1q0u_A_1341q0u   A     MSESELENOMETHIONINE P - 134
1q0u_A_1341q0u   A     MSESELENOMETHIONINE V - 148
1q0u_A_1341q0u   A     MSESELENOMETHIONINE H - 149
1q0u_A_1341q0u   A     MSESELENOMETHIONINE A - 151
1q0u_A_1341q0u   A     MSESELENOMETHIONINE H - 152
1q0u_A_1341q0u   A     MSESELENOMETHIONINE I - 153
1q0u_A_1341q0u   A     MSESELENOMETHIONINE L - 154
1q0u_A_1341q0u   A     MSESELENOMETHIONINE V - 155
1q0u_A_1341q0u   A     MSESELENOMETHIONINE V - 156

Clusters included in this Subclass
CLUSTER: HE.9.6