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Information on SUBCLASS 2.3.12
Subclass Accession number: 4590
Subclass: 2.3.12 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 11.8 +/- 12.8
Average RMSD (Å) : 0.825 +/- 0.126

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hphpXX
(φψ)-conformation: aabpaa
Pattern: x[DR][ADQ][AILM]x[DRS][AFT][LMWY]xxx[EHKN][AG][ERSY][LMV][DHNS]x[AKV][ERT]x[AGMT]x[LVY][CGKL]
Conservation:-1.0781.656-0.1500.357-0.0160.0700.0490.677-1.557-0.526-0.6000.7561.971-0.7591.7690.7560.081-0.0360.423-1.397-0.839-0.4530.642-1.796
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gqi_A_6081gqi   A623646VRAMQRTWDQQEAYVDAARFAQVKHHHHHHHHHTTGGGS-HHHHHHHHaaaaaaaaaaaaaabpaaaaaaaa
1hs6_A_5811hs6   A581604HDQAVRTYQEHKASMHPVTAMLVGHHHHHHHHHHHGGGS-HHHHHHHHaaaaaaaaaaaaaaxxaaaaaaaa
1re0_B_1351re0   B135158NRDIASFLFLNNGRLNKKTIGLLLHHHHHHHHHHHGGGS-HHHHHHHHaaaaaaaaaaaaaabxaaaaaaaa
1rwh_A_1311rwh   A133156PRALADAMVLLHAELSAAERTAYCHHHHHHHHHHTTTTS-HHHHHHHHaaaaaaaaaaaaaaxxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gqi_A_6081gqi   A     COCOBALT (II) ION W - 609
1gqi_A_6081gqi   A     COCOBALT (II) ION Q - 610
1gqi_A_6081gqi   A     COCOBALT (II) ION Q - 622
1gqi_A_6081gqi   A     EDO1,2-ETHANEDIOL R - 624
1gqi_A_6081gqi   A     COCOBALT (II) ION A - 625
1gqi_A_6081gqi   A     COCOBALT (II) ION M - 626
1gqi_A_6081gqi   A     EDO1,2-ETHANEDIOL Q - 627
1gqi_A_6081gqi   A     EDO1,2-ETHANEDIOL R - 628
1gqi_A_6081gqi   A     COCOBALT (II) ION T - 629
1gqi_A_6081gqi   A     EDO1,2-ETHANEDIOL D - 631
1gqi_A_6081gqi   A     COCOBALT (II) ION R - 641
1gqi_A_6081gqi   A     COCOBALT (II) ION Q - 644
1gqi_A_6081gqi   A     EDO1,2-ETHANEDIOL K - 646
1gqi_A_6081gqi   A     EDO1,2-ETHANEDIOL A - 647
1gqi_A_6081gqi   A     EDO1,2-ETHANEDIOL Q - 650
1rwh_A_1311rwh   A     GAD2,6-ANHYDRO-3-DEOXY-D-ERYTHRO-HEX-2-ENONIC ACID R - 134
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gqi_A_6081gqi   A BC1EDO BINDING SITE FOR CHAIN AQ - 627
1gqi_A_6081gqi   A BC1EDO BINDING SITE FOR CHAIN AD - 631
1gqi_A_6081gqi   A BC1EDO BINDING SITE FOR CHAIN AK - 646
1gqi_A_6081gqi   A BC1EDO BINDING SITE FOR CHAIN AQ - 650

Clusters included in this Subclass
CLUSTER: HH.6.114