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Information on SUBCLASS 2.11.2
Subclass Accession number: 4640
Subclass: 2.11.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 46457 (>75 %)  46458 (>75 %)  46532 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 50.0 +/- 36.8
Average RMSD (Å) : 0.525 +/- 0.330

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 0-45 rho (°): 315-360
Consensus Sequence: XhhXhX
(φψ)-conformation: aaplaa
Pattern: [ET][AP][IV][EY][EQ][i][GS][FILV][AV][g][CV][r][E][m][GY][KN]
Conservation:-0.3230.0081.121-0.3781.125-1.5600.218-0.576-0.3260.1080.260-1.0192.573-1.074-0.5300.373
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1all_A_1051all   A105120TPIEEIGVVGVREMYKHHHHHHHTTTHHHHHHaaaaaaaapvaaaaaa
1b33_A_1011b33   A101116TPIEEIGIVGVREMYKHHHHHHHTTTHHHHHHaaaaaaaaxvaaaaaa
1kn1_A_1051kn1   A105120TPIEEIGLVGVREMYKHHHHHHHTTTHHHHHHaaaaaaNaxvaaaaaa
1q4m_A_1351q4m   A140155EAVYQESFAHCLEDGNHHHHHHHHTTHHHHHHaaaaaaaaxvaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1all_A_1051all   A     CYCPHYCOCYANOBILIN I - 110
1all_A_1051all   A     CYCPHYCOCYANOBILIN G - 111
1all_A_1051all   A     CYCPHYCOCYANOBILIN V - 115
1all_A_1051all   A     CYCPHYCOCYANOBILIN M - 118
1all_A_1051all   A     CYCPHYCOCYANOBILIN Y - 119
1all_A_1051all   A     CYCPHYCOCYANOBILIN L - 122
1b33_A_1011b33   A     CYCPHYCOCYANOBILIN I - 106
1b33_A_1011b33   A     CYCPHYCOCYANOBILIN G - 107
1b33_A_1011b33   A     CYCPHYCOCYANOBILIN V - 111
1b33_A_1011b33   A     CYCPHYCOCYANOBILIN M - 114
1b33_A_1011b33   A     CYCPHYCOCYANOBILIN Y - 115
1b33_A_1011b33   A     CYCPHYCOCYANOBILIN L - 118
1q4m_A_1351q4m   A     MSESELENOMETHIONINE A - 135
1q4m_A_1351q4m   A     MSESELENOMETHIONINE F - 136
1q4m_A_1351q4m   A     MSESELENOMETHIONINE W - 137
1q4m_A_1351q4m   A     MSESELENOMETHIONINE A - 138

Clusters included in this Subclass
CLUSTER: HH.2.169