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Information on SUBCLASS 2.1.2
Subclass Accession number: 467
Subclass: 2.1.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 63

Average sequence ID (%) : 11.5 +/- 13.7
Average RMSD (Å) : 0.437 +/- 0.147

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXcXX
(φψ)-conformation: bblgbp
Pattern: xxxxx[adegknqrs][degknqs]xxx
Conservation:-0.859-0.300-0.285-0.479-0.3041.0752.3640.168-0.836-0.545
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a1x_*_851a1x   -9099HHLMVRGVQEEEEEETTEEEbbbxblvbxb
1azp_A_291azp   A3241FTYDDNGKTGEEEEETTEEEbbbxblgbxx
1ctq_A_371ctq   A4251KQVVIDGETCEEEEETTEEEbxbbblvxxb
1deu_A_1801deu   A186195GWGISDGTEYEEEEETTEEEebbbblvbxb
1e42_A_7231e42   A728737TFTHRQGHIYEEEEETTEEEbbbbblvbxb
1e5p_A_471e5p   A4958FYVITNNQCSEEEEETTEEEbbbxbllbxb
1eaj_A_691eaj   A7180IILYSGDKIYEEEEETTEEEabbbblvbbb
1ei5_A_4371ei5   A440449LLVSEGGAIYEEEEETTEEEbbbbbvvxxb
1ew4_A_681ew4   A7079HFDLKGDEWIEEEEETTEEEbbbxbvvbxb
1f39_A_1891f39   A193202KLIRDSGQVFEEEEETTEEExxbbblvbxb
1feh_A_4541feh   A457466AEVEINNNKYEEEEETTEEEbxbxbllbxb
1fmb_*_101fmb   -1120TIVLINDTPLEEEEETTEEEbxbxblvbwb
1fw9_A_1241fw9   A130139EIGRDAGLWGEEEEETTEEEbbbbblvbxb
1fw9_A_1371fw9   A142151SRLRLSGKPLEEEEETTEEEbxbbblvbwb
1ggx_A_1461ggx   A149158RLYPRDGVLKEEEEETTEEEbbbxblvbbb
1gj7_B_1981gj7   B199208LVCSLQGRMTEEEEETTEEEbbbxblvbxb
1gpc_*_1731gpc   -176185KVKQVSGFSNEEEEETTEEEbbbxblvbpb
1gqi_A_1011gqi   A104113EQTRINKRHVEEEEETTEEEbxbbblvxxb
1gx3_A_1621gx3   A165174LAAQVRGEWQEEEEETTEEExbbxblvbxb
1gyh_A_2861gyh   A293302SAYTWDGKDYEEEEETTEEEbbbbblvbbb
1gyv_A_7941gyv   A798807LTYNHKGSAMEEEEETTEEEbbbbblvbxb
1h0b_A_1401h0b   A143152ATVELAGATWEEEEETTEEEbbbxblvbbb
1h0h_B_511h0h   B5564HEQEIDGRIDEEEEETTEEEbxbxblvbxb
1h30_A_3441h30   A347356VLALRAGRLEEEEEETTEEEbbbbblvbxb
1hms_*_791hms   -8392IVTLDGGKLVEEEEETTEEEbbbbblvxxb
1hwl_A_5381hwl   A542551GPLCLDEKEFEEEEETTEEEewbxblvbbb
1j71_A_891j71   A97106DTVGFGGISIEEEEETTEEEbxbbblvbbb
1jlx_A_1741jlx   A176185GVITINQLPCEEEEETTEEEbxbxblvbwx
1k3x_A_2451k3x   A245254EKTTLSSRPFEEEEETTEEEbbbbblvbwM
1kb0_A_3161kb0   A318327ADIKIAGKPREEEEETTEEEbbbxblvbwb
1koi_A_411koi   A4554AAGTASGKLKEEEEETTEEEbbbxblvbxb
1ksi_A_661ksi   A6978VVAIINSQTHEEEEETTEEEbbbxblvbxb
1ktg_A_31ktg   A1019IYRKLAGKIEEEEEETTEEExbbbblvbxb
1l6m_A_1181l6m   A123132FKKVSQNREYEEEEETTEEEbbbbblvxxb
1l6m_A_641l6m   A6877SVLFRKKKCDEEEEETTEEEbbbxblUbbb
1lf6_A_1661lf6   A169178YVIKANNNEMEEEEETTEEEbbbbblvbxb
1lf7_A_631lf7   A6877TFRKLDGICWEEEEETTEEEbbbxblvbxb
1luz_A_141luz   A1827RVYEKDYALYEEEEETTEEEbxbbblvbbb
1m22_A_4831m22   A487496PMGQIDGLPVEEEEETTEEEwaebblvbpb
1m2x_A_521m2x   A5766TYNTFNGTKYEEEEETTEEEbbbxblvbxx
1m3q_A_541m3q   A5564WSGVLADQVWEEEEETTEEEbbexblvbxb
1m61_A_1971m61   A200209LSLIYGKTVYEEEEETTEEExbbbbvlbxb
1my6_A_1271my6   A130139WLVLEAGTLKEEEEETTEEEbbbbblvbxb
1nh1_A_1571nh1   A164173QTAYLHGNVIEEEEETTEEExbbxbvgxxb
1npp_A_2241npp   A227236VMISIFGRMTEEEEETTEEEbxbxblvbxb
1oew_A_831oew   A91100DTVSVGGLTVEEEEETTEEEbxbbbvvxbb
1orv_A_5111orv   A515524DVINLHGTKFEEEEETTEEEbbbxblvbxb
1p8x_A_4461p8x   A451460YNYRHGGRQGEEEEETTEEEbbbbblvbxb
1qex_A_2511qex   A253262AFSIKENYVTEEEEETTEEEbbbbblvbpb
1qfm_A_3481qfm   A351360LCYLHDVKNTEEEEETTEEEbbbbblvbxb
1qnx_A_1671qnx   A173182IKYIQEKWHKEEEEETTEEEbbbbblvxxb
1qq9_A_511qq9   A5564QQFTSGGATGEEEEETTEEEbxbbbvvbxb
1r0u_A_21r0u   A1322SVIEDDGNQEEEEEETTEEEbbbbblgxbb
1rss_*_731rss   -7685RSRRVGGANYEEEEETTEEExxbxblvbxb
1ry9_A_401ry9   A4453NIALVNEQVMEEEEETTEEEbbbxbvvbxb
1thf_D_1251thf   D130139DAKRVDGEFMEEEEETTEEExbbxblvbxb
1uch_*_1681uch   -172181ALVHVDGHLYEEEEETTEEEbbbbblvbxb
1v3e_A_5281v3e   A534543SCITHYNKGYEEEEETTEEEbbbbblgxxb
2apr_*_822apr   -9099DNVNLGGLLIEEEEETTEEEbxbbblvxxx
2nlr_A_1362nlr   A139148GTASVGGRTWEEEEETTEEEeeMbbvvbxb
3rab_A_573rab   A6271KTIYRNDKRIEEEEETTEEEbxbbblvbbb
4bcl_*_644bcl   -7079IESVVDSVKNEEEEETTEEEbbbbblvxxb
4fiv_*_154fiv   -1625ILIFVNGYPIEEEEETTEEEbxbxblvbwb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ctq_A_371ctq   A     MGMAGNESIUM ION D - 57
1ctq_A_371ctq   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER D - 57
1ctq_A_371ctq   A     MGMAGNESIUM ION T - 58
1ctq_A_371ctq   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER T - 58
1e42_A_7231e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED H - 731
1e42_A_7231e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED Q - 733
1e42_A_7231e42   A     MO5MAGNESIUM ION, 5 WATERS COORDINATED G - 734
1e5p_A_471e5p   A     MSESELENOMETHIONINE I - 47
1e5p_A_471e5p   A     MSESELENOMETHIONINE V - 62
1fmb_*_101fmb   *     HYB[2-(2-METHYL-PROPANE-2-SULFONYLMETHYL)-3-NAPHTHALEN-1-YL-PROPIONYL-VALINYL]-PHENYLALANINOL L - 23
1fw9_A_1241fw9   A     PHBP-HYDROXYBENZOIC ACID R - 140
1fw9_A_1371fw9   A     PHBP-HYDROXYBENZOIC ACID L - 153
1fw9_A_1371fw9   A     PHBP-HYDROXYBENZOIC ACID T - 154
1fw9_A_1371fw9   A     PHBP-HYDROXYBENZOIC ACID E - 155
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID S - 146
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID T - 147
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID E - 148
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID I - 161
1ggx_A_1461ggx   A     CRQ[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC ACID K - 163
1gj7_B_1981gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE V - 213
1gj7_B_1981gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE S - 214
1gj7_B_1981gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE W - 215
1gqi_A_1011gqi   A     EDO1,2-ETHANEDIOL Y - 101
1h0h_B_511h0h   B     SSULFUR ATOM V - 52
1h0h_B_511h0h   B     FS4IRON/SULFUR CLUSTER V - 52
1h0h_B_511h0h   B     SSULFUR ATOM R - 53
1h0h_B_511h0h   B     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID R - 53
1h0h_B_511h0h   B     SSULFUR ATOM F - 67
1h0h_B_511h0h   B     FS4IRON/SULFUR CLUSTER F - 67
1h0h_B_511h0h   B     SSULFUR ATOM P - 69
1h0h_B_511h0h   B     FS4IRON/SULFUR CLUSTER P - 69
1h0h_B_511h0h   B     SSULFUR ATOM D - 70
1h0h_B_511h0h   B     FS4IRON/SULFUR CLUSTER D - 70
1hms_*_791hms   *     OLAOLEIC ACID Q - 95
1hwl_A_5381hwl   A     ADPADENOSINE-5'-DIPHOSPHATE V - 540
1j71_A_891j71   A     EOHETHANOL G - 102
1j71_A_891j71   A     EOHETHANOL G - 103
1j71_A_891j71   A     EOHETHANOL I - 104
1k3x_A_2451k3x   A     PEDPENTANE-3,4-DIOL-5-PHOSPHATE R - 252
1k3x_A_2451k3x   A     PEDPENTANE-3,4-DIOL-5-PHOSPHATE P - 253
1k3x_A_2451k3x   A     PEDPENTANE-3,4-DIOL-5-PHOSPHATE Y - 255
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 41
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 42
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 43
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 44
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 55
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 57
1koi_A_411koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 59
1koi_A_411koi   A     NMONITROGEN MONOXIDE H - 59
1ktg_A_31ktg   A     MGMAGNESIUM ION L - 14
1ktg_A_31ktg   A     MGMAGNESIUM ION K - 17
1ktg_A_31ktg   A     MGMAGNESIUM ION E - 19
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID S - 68
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID L - 70
1l6m_A_641l6m   A     FEFE (III) ION W - 79
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID W - 79
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID I - 80
1l6m_A_641l6m   A     FEFE (III) ION R - 81
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID R - 81
1l6m_A_641l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID R - 81
1l6m_A_641l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID F - 83
1l6m_A_1181l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID F - 123
1l6m_A_1181l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID F - 123
1l6m_A_1181l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID K - 124
1l6m_A_1181l6m   A     FEFE (III) ION K - 125
1l6m_A_1181l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID K - 125
1l6m_A_1181l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID K - 125
1l6m_A_1181l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID S - 127
1l6m_A_1181l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID Y - 132
1l6m_A_1181l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID F - 133
1l6m_A_1181l6m   A     FEFE (III) ION K - 134
1l6m_A_1181l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID K - 134
1l6m_A_1181l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID K - 134
1lf7_A_631lf7   A     CITCITRIC ACID T - 68
1lf7_A_631lf7   A     CITCITRIC ACID R - 70
1m2x_A_521m2x   A     MCO1-(3-MERCAPTO-2-METHYL-PROPIONYL)-PYRROLIDINE-2-CARBOXYLIC ACID F - 61
1my6_A_1271my6   A     FEFE (III) ION W - 128
1p8x_A_4461p8x   A     CACALCIUM ION S - 446
1r0u_A_21r0u   A     GOLGLYCEROL V - 11
1r0u_A_21r0u   A     GOLGLYCEROL F - 26
1thf_D_1251thf   D     PO4PHOSPHATE ION T - 142
1v3e_A_5281v3e   A     ZMRZANAMIVIR Y - 530
3rab_A_573rab   A     MGMAGNESIUM ION D - 77
3rab_A_573rab   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER D - 77
3rab_A_573rab   A     MGMAGNESIUM ION T - 78
3rab_A_573rab   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER T - 78
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A V - 64
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A R - 65
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A F - 66
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A T - 68
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A I - 70
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A E - 71
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A S - 72
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A V - 73
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A V - 74
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A N - 79
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A T - 80
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A L - 81
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A V - 83
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A V - 85
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A I - 87
4bcl_*_644bcl   *     BCLBACTERIOCHLOROPHYLL A A - 88
4fiv_*_154fiv   *     1NI4-[2-(2-ACETYLAMINO-3-NAPHTHALEN-1-YL-PROPIONYLAMINO)-3-METHYL-BUTYRYLAMINO]-3-HYDROXY-6-METHYL-HEPTANOIC ACID [1-(1-CARBAMOYL-2-NAPHTHALEN-1-YL-ETHYLCARBAMOYL) -PROPYL]-AMIDE L - 28
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gqi_A_1011gqi   A AC2EDO BINDING SITE FOR CHAIN AY - 101
1h30_A_3441h30   A SO2SO4 BINDING SITE FOR CHAIN AR - 360
1uch_*_1681uch   * CATACTIVE SITE RESIDUES.H - 169

Clusters included in this Subclass
CLUSTER: HA.1.6
CLUSTER: HA.3.12