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Information on SUBCLASS 3.3.3
Subclass Accession number: 4682
Subclass: 3.3.3 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 10.3 +/- 12.7
Average RMSD (Å) : 0.744 +/- 0.273

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: ppXXpXp
(φψ)-conformation: aapapaa
Pattern: xx[acilvwy][aegqrst]xx[denpqrst][denst]x[denqsy]xxxx[aciklmv]
Conservation:-0.469-1.001-0.4500.616-0.377-0.026-0.5122.745-0.6301.1170.129-0.164-1.093-0.7690.883
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3a_A_1251a3a   A129143ERLAHTTSVDEVLELHHHHH---HHHHHHHaaaaaxabaaaaaaa
1a6j_A_1341a6j   A138152RRLRAAQSDEELYQIHHHHH--SHHHHHHHaaaaapabaaaaaaa
1cm8_A_2471cm8   A248262EFVQRLQSDEAKNYMHHHHT-S-HHHHHHHaaaaapaxaaaaaaa
1ezf_A_2701ezf   A275289TYLSRLRNQSVFNFCHHHHT---HHHHHHHaaaaaxaxaaaaaaa
1h6g_A_4131h6g   A436450LACSISNNEEGVKLVHHHTT---HHHHHHHaaaaabaxaaaaaaa
1hf8_A_561hf8   A6478FERTTNSSWVVVFKSHHHTTSS-HHHHHHHaaaaaxaxaaaaaaa
1k0m_A_1101k0m   A115129SAYIKNSNPALNDNLHHHHH---HHHHHHHaaaaaxaxaaaaaaa
1kid_*_3391kid   -351365QQIEEATSDYDREKLHHHHH--SHHHHHHHaaaaaxabaaaaaaa
1m0u_A_1281m0u   A149163AVVSYEPEDEIKEKKHHHHT-SSHHHHHHHaaaaapaxaaaaaaa
1mhy_B_2281mhy   B236250EIWQGVQDWNEILWAHHHHS---HHHHHHHaaaaabapaaaaaaa
1mty_B_1641mty   B165179QGAREALSDVTRVSLHHHHH-SSHHHHHHHaaaaapabaaaaaaa
1mty_B_2251mty   B233247GLWQEVFDWNESAFSHHHHT---HHHHHHHaaaaabaxaaaaaaa
1omw_A_801omw   A90104KKYEKLETEEERLVCHHHHT--SHHHHHHHaaaaaxabaaaaaaa
1owl_A_2541owl   A263277AAHALSRSDEARNSIHHHHH---HHHHHHHaaaaaxabaaaaaaa
1qsa_A_5721qsa   A574588AFVESIPFSETRGYVHHHHH-S-HHHHHHHaaaaapaxaaaaaaa
1rcw_A_481rcw   A6074AIHSRCDDLEARKLLHHHTT---HHHHHHHaaaaabaxaaaaaaa
1vf6_C_1221vf6   C133147HIQHTLVDSQSQEDIHHHTT--SHHHHHHHaaaaaxaxaaaaaaa
3thi_A_1243thi   A124138LKIGQVDNIYELYKKHHHHT--BHHHHHHHaaaaaxabaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID Y - 276
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID F - 288
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID C - 289
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID P - 292
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID Q - 293
1ezf_A_2701ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID M - 295
1h6g_A_4131h6g   A     MSESELENOMETHIONINE V - 447
1h6g_A_4131h6g   A     MSESELENOMETHIONINE K - 448
1h6g_A_4131h6g   A     CACALCIUM ION K - 448
1h6g_A_4131h6g   A     MSESELENOMETHIONINE L - 449
1h6g_A_4131h6g   A     CACALCIUM ION L - 449
1h6g_A_4131h6g   A     MSESELENOMETHIONINE V - 450
1h6g_A_4131h6g   A     CACALCIUM ION V - 450
1m0u_A_1281m0u   A     GTTGLUTATHIONE N - 142
1m0u_A_1281m0u   A     GTTGLUTATHIONE R - 145
1owl_A_2541owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 280
1owl_A_2541owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 283
1owl_A_2541owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 284
1owl_A_2541owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 286
1owl_A_2541owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 287
1owl_A_2541owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 290
1qsa_A_5721qsa   A     GOLGLYCEROL A - 572
1qsa_A_5721qsa   A     GOLGLYCEROL V - 573
1qsa_A_5721qsa   A     GOLGLYCEROL A - 574
1qsa_A_5721qsa   A     GOLGLYCEROL Y - 587
1qsa_A_5721qsa   A     GOLGLYCEROL Y - 594
1qsa_A_5721qsa   A     GOLGLYCEROL D - 595
1qsa_A_5721qsa   A     GOLGLYCEROL A - 596
1qsa_A_5721qsa   A     GOLGLYCEROL R - 599
1rcw_A_481rcw   A     MSESELENOMETHIONINE A - 53
1rcw_A_481rcw   A     FEFE (III) ION F - 54
1rcw_A_481rcw   A     MSESELENOMETHIONINE K - 56
1rcw_A_481rcw   A     MSESELENOMETHIONINE Y - 57
1rcw_A_481rcw   A     MSESELENOMETHIONINE A - 60
1rcw_A_481rcw   A     MSESELENOMETHIONINE S - 63
1rcw_A_481rcw   A     MSESELENOMETHIONINE D - 67
1rcw_A_481rcw   A     MSESELENOMETHIONINE E - 69
1rcw_A_481rcw   A     MSESELENOMETHIONINE A - 70
1rcw_A_481rcw   A     MSESELENOMETHIONINE K - 72
1rcw_A_481rcw   A     MSESELENOMETHIONINE L - 73
1rcw_A_481rcw   A     MSESELENOMETHIONINE L - 74
1rcw_A_481rcw   A     MSESELENOMETHIONINE L - 75
1rcw_A_481rcw   A     MSESELENOMETHIONINE D - 76
1rcw_A_481rcw   A     MSESELENOMETHIONINE N - 77
1rcw_A_481rcw   A     FEFE (III) ION N - 77

Clusters included in this Subclass
CLUSTER: HH.2.110
CLUSTER: HH.3.103
CLUSTER: HH.4.65
CLUSTER: HH.5.60