Information on SUBCLASS 3.3.5 |
Subclass Accession number: 4684
Subclass: 3.3.5 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 11.3 +/- 11.7 Average RMSD (Å) : 0.743 +/- 0.282 Consensus geometry
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Consensus Sequence: | XXXXXXX |
(φψ)-conformation: | aapapaa |
Pattern: | x | [FGILV] | [AIL] | [fklv] | [ALMV] | x | x | x | [EKPT] | [cden] | [dgkqs] | [CEQW] | [cdekst] | [akrs] | x | [hknsy] | x | [fiklv] | x | [giltv] | [FGIL] | x |
Conservation: | -0.737 | 0.631 | 2.222 | -0.228 | 1.439 | -0.620 | -0.938 | -0.815 | 2.368 | 0.320 | -0.587 | 0.963 | -0.969 | 0.395 | -0.856 | -0.425 | -0.936 | -0.370 | -0.497 | -0.378 | 0.590 | -0.571 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f7c_A_275 | 1f7c | A | 280 | 301 | SFIKAAKLENQESRVSEIHSLV | HHHHHHT-SSHHHHHHHHHHHH | aaaaaaapaxaaaaaaaaaaaa |
1hn0_A_450 | 1hn0 | A | 453 | 474 | HLALLLLEPDDQKRINLVNTFS | HHHHHHT-SSHHHHHHHHHHHH | aaaaaaapaxaaaaaaaaaaaa |
1jr8_A_35 | 1jr8 | A | 45 | 66 | IGLYAELYPCGECSYHFVKLIE | HHHHHHH-SSHHHHHHHHHHHH | aaaaaaapabaaaaaaaaaaaa |
1js8_A_2646 | 1js8 | A | 2650 | 2671 | QIALALEQTDFCDFEIQFEIGH | HHHHHHH--SHHHHHHHHHHHH | aaaaaaaxabaaaaaaaaaaaa |
1m0u_A_128 | 1m0u | A | 147 | 168 | KIAVVSYEPEDEIKEKKLVTLN | HHHHHHT-SSHHHHHHHHHHHH | aaaaaaapaxaaaaaaaaaaaa |
1mty_G_87 | 1mty | G | 94 | 115 | TVAKMNAAKDKWEAEKIHIGFR | HHHHHHH--SHHHHHHHHHHHH | aaaaaaapabaaaaaaaaaaaa |
1qsa_A_572 | 1qsa | A | 572 | 593 | AVAFVESIPFSETRGYVKNVLA | HHHHHHH-S-HHHHHHHHHHHH | aaaaaaapaxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 48 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 52 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | C - 54 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 56 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | C - 57 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | S - 58 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 60 |
1jr8_A_35 | 1jr8 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 61 |
1js8_A_2646 | 1js8 | A | CUOCU2-O2 CLUSTER | H - 2671 |
1js8_A_2646 | 1js8 | A | CUOCU2-O2 CLUSTER | N - 2672 |
1js8_A_2646 | 1js8 | A | CUOCU2-O2 CLUSTER | H - 2675 |
1m0u_A_128 | 1m0u | A | GTTGLUTATHIONE | N - 142 |
1m0u_A_128 | 1m0u | A | GTTGLUTATHIONE | R - 145 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | A - 572 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | V - 573 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | A - 574 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | Y - 587 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | Y - 594 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | D - 595 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | A - 596 |
1qsa_A_572 | 1qsa | A | GOLGLYCEROL | R - 599 |
Clusters included in this Subclass |
CLUSTER: HH.3.86 |