Information on SUBCLASS 2.1.4 |
Subclass Accession number: 469
Subclass: 2.1.4 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 47 Average sequence ID (%) : 15.8 +/- 17.6 Average RMSD (Å) : 0.345 +/- 0.133 Consensus geometry
|
Consensus Sequence: | XXXcXX |
(φψ)-conformation: | bblgbb |
Pattern: | [acfgikltv] | x | x | [adegknqrs] | [DGKNQST] | x | x |
Conservation: | -0.368 | -0.299 | -0.488 | -0.049 | 2.227 | -0.352 | -0.670 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1acf_*_60 | 1acf | - | 60 | 66 | FDLAGVH | EEETTEE | bbblvbx |
1aui_A_319 | 1aui | A | 323 | 329 | KYENNVM | EEETTEE | bxblvbb |
1b6a_*_248 | 1b6a | - | 254 | 260 | THISGRI | EEETTEE | bbblvxx |
1bdo_*_114 | 1bdo | - | 118 | 124 | VEAMKMM | EEETTEE | bbblvxb |
1bm8_*_5 | 1bm8 | - | 8 | 14 | ARYSGVD | EEETTEE | bbblvbx |
1bte_A_40 | 1bte | A | 46 | 52 | KNISGSI | EEETTEE | bbblvxx |
1bup_A_205 | 1bup | A | 211 | 217 | TIEDGIF | EEETTEE | bbblvbx |
1bup_A_93 | 1bup | A | 95 | 101 | VNDAGRP | EEETTEE | bbblvbw |
1cjx_A_294 | 1cjx | A | 298 | 304 | SSVEGDK | EEETTEE | bbblgxb |
1d2o_A_609 | 1d2o | A | 612 | 618 | DINGTTI | EEETTEE | bbblgxb |
1e42_A_723 | 1e42 | A | 730 | 736 | THRQGHI | EEETTEE | bbblvbx |
1f39_A_189 | 1f39 | A | 195 | 201 | IRDSGQV | EEETTEE | bbblvbx |
1fgy_A_281 | 1fgy | A | 287 | 293 | ILTDNCL | EEETTEE | bxbllbb |
1fmb_*_10 | 1fmb | - | 13 | 19 | VLINDTP | EEETTEE | bxblvbw |
1fmb_*_63 | 1fmb | - | 69 | 75 | IKKKGRH | EEETTEE | bbblUbb |
1fqt_A_17 | 1fqt | A | 20 | 26 | VESGGTS | EEETTEE | bbblvbb |
1ftr_A_133 | 1ftr | A | 135 | 141 | DELDGRK | EEETTEE | bbblvxx |
1g13_A_50 | 1g13 | A | 57 | 63 | KEVAGLW | EEETTEE | bxblvbx |
1g86_A_61 | 1g86 | A | 66 | 72 | SREYGAW | EEETTEE | bbblvbx |
1gx3_A_162 | 1gx3 | A | 167 | 173 | AQVRGEW | EEETTEE | bxblvbx |
1h0b_A_140 | 1h0b | A | 145 | 151 | VELAGAT | EEETTEE | bxblvbb |
1hdm_B_19 | 1hdm | B | 26 | 32 | ISFNKDL | EEETTEE | bbblvbx |
1iup_A_8 | 1iup | A | 10 | 16 | ILAAGVL | EEETTEE | bxblvbx |
1j1t_A_148 | 1j1t | A | 154 | 160 | VNNYGDV | EEETTEE | bbxlgbx |
1j20_A_335 | 1j20 | A | 340 | 346 | KLYKGNV | EEETTEE | bbblgbb |
1jlx_A_174 | 1jlx | A | 178 | 184 | ITINQLP | EEETTEE | bxblvbw |
1js3_A_436 | 1js3 | A | 438 | 444 | CRLRGQF | EEETTEE | bbbvvxx |
1k20_A_206 | 1k20 | A | 209 | 215 | FELNGNN | EEETTEE | bbblvbx |
1ktg_A_3 | 1ktg | A | 12 | 18 | RKLAGKI | EEETTEE | bbblvbx |
1lf6_A_166 | 1lf6 | A | 171 | 177 | IKANNNE | EEETTEE | bbblvbx |
1mky_A_41 | 1mky | A | 44 | 50 | VEWYGKT | EEETTEE | bbblvxb |
1nep_A_52 | 1nep | A | 57 | 63 | GIVMGIP | EEETTEE | bxblvbw |
1nez_G_98 | 1nez | G | 104 | 110 | VISNSVM | EEETTEE | bbblvbx |
1nh0_A_10 | 1nh0 | A | 13 | 19 | IKIGGQL | EEETTEE | bbblvxx |
1olr_A_136 | 1olr | A | 141 | 147 | VNLAGRT | EEETTEE | bbblvbb |
1pfb_A_28 | 1pfb | A | 35 | 41 | RVKKGVV | EEETTEE | bbblvxx |
1pne_*_63 | 1pne | - | 63 | 69 | LTLGGQK | EEETTEE | bbbvvxx |
1qcs_A_135 | 1qcs | A | 138 | 144 | FSFNDKL | EEETTEE | bxblvbx |
1qmg_A_96 | 1qmg | A | 98 | 104 | VTLSGHD | EEETTEE | bbblvbx |
1qw2_A_23 | 1qw2 | A | 26 | 32 | IEIGGKV | EEETTEE | bbblvbx |
1r0u_A_2 | 1r0u | A | 15 | 21 | IEDDGNQ | EEETTEE | bbblgxb |
1s18_A_287 | 1s18 | A | 294 | 300 | EEDSGRV | EEETTEE | bbblvxb |
1sty_*_22 | 1sty | - | 25 | 31 | LMYKGQP | EEETTEE | bxblvbw |
1uqt_A_210 | 1uqt | A | 211 | 217 | HTAWGKA | EEETTEE | bbblvbx |
1vjl_A_70 | 1vjl | A | 79 | 85 | SLKDNTF | EEETTEE | bbblvbx |
2nlr_A_136 | 2nlr | A | 141 | 147 | ASVGGRT | EEETTEE | Mbbvvbx |
4fiv_*_15 | 4fiv | - | 18 | 24 | IFVNGYP | EEETTEE | bxblvbw |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1bte_A_40 | 1bte | A | NAGGLYCOSYLATION SITE | N - 47 |
Clusters included in this Subclass |
CLUSTER: HA.1.110 |
CLUSTER: HA.1.15 |
CLUSTER: HA.1.51 |
CLUSTER: HA.2.19 |
CLUSTER: HA.3.194 |
CLUSTER: HA.3.221 |
CLUSTER: HA.3.25 |