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Information on SUBCLASS 3.4.5
Subclass Accession number: 4697
Subclass: 3.4.5 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 13.0 +/- 15.4
Average RMSD (Å) : 0.730 +/- 0.389

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: XXXXXhX
(φψ)-conformation: aalbpaa
Pattern: [afglmvwy]x[aegqst]x[AEGR][aekqr]xx[egknr]x[KPT][flpv]x[AEKNQ][aflmvy]
Conservation:-0.715-0.704-0.115-0.8631.4210.678-0.599-1.0720.199-0.3372.309-0.542-0.7721.348-0.236
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1au7_A_61au7   A1630FKVRRIKLGYTQTNVHHHHHHHHT--HHHHaaaaaaaagbbaaaa
1ci9_A_1841ci9   A189203GAVVERATGQPLAAAHHHHHHHHTS-HHHHaaaaaaaavbxaaaa
1cp2_A_2121cp2   A213227MVTKAEINKQTVIEYHHHHHHHTTS-HHHHaaaaaaaalbxaaaa
1f2v_A_1041f2v   A105119TPALAAEIGNTRSAAHHHHHHHHTS-HHHHaaaaaaaavbxaaaa
1fp6_A_2161fp6   A216230VVQRAEIRRMTVIEYHHHHHHTTTS-HHHHaaaaaaaalbxaaaa
1jpm_A_971jpm   A108122YDGWAQMCGLPLYQMHHHHHHHTTSBHHHHaaaaaaaavbxaaaa
1muc_A_1021muc   A113127LDAQGKRLGLPVSELHHHHHHHHT-BHHHHaaaaaaaavbxaaaa
1nvt_A_1601nvt   A167181AKEIAEKLNKKFGEEHHHHHHHHT--HHHHaaaaaaaalbxaaaa
1pjr_*_1411pjr   -147161TISAAKNELLPPEQFHHHHHHHTT--HHHHaaaaaaaalbxaaaa
2mnr_*_982mnr   -112126WDALGKVHETPLVKLHHHHHHHTTSBHHHHaaaaaaaalbwaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fp6_A_2161fp6   A     ADPADENOSINE-5'-DIPHOSPHATE V - 217
1fp6_A_2161fp6   A     ADPADENOSINE-5'-DIPHOSPHATE Q - 218
1fp6_A_2161fp6   A     ADPADENOSINE-5'-DIPHOSPHATE E - 221
1jpm_A_971jpm   A     GOLGLYCEROL D - 109
1jpm_A_971jpm   A     GOLGLYCEROL Q - 113
1nvt_A_1601nvt   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 162

Clusters included in this Subclass
CLUSTER: HH.3.107
CLUSTER: HH.4.104