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Information on SUBCLASS 3.5.7
Subclass Accession number: 4710
Subclass: 3.5.7 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 17.6 +/- 17.5
Average RMSD (Å) : 0.825 +/- 0.236

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: chhcDhp
(φψ)-conformation: aapabaa
Pattern: xx[KNP][AI][AVWY][DKN][D][GPV][DRS]x[FMTV]xx[DET]x[IKLV][AET]
Conservation:-0.961-0.3390.1170.122-0.4530.6243.553-0.304-0.198-0.548-0.357-0.588-0.3100.567-0.542-0.310-0.074
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ii2_A_4751ii2   A475491PRKAWKDVRQFNETSKEHHHH-S-HHHHHHHHHHaaaaxabaaaaaaaaaa
1mxr_A_1021mxr   A126142IRNIVNDPSVVFDDIVTHHTT-S-HHHHHHHHHHaaaababaaaaaaaaaa
1on3_A_4511on3   A453469EIKAADDPDAMRAEKIEHHHHSS-HHHHHHHHHHaaaaxabaaaaaaaaaa
1uzx_A_111uzx   A2137IQPIYNDGRTTFHDSLAHHHH-TTHHHHHHHHHHaaaaxabaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mxr_A_1021mxr   A     FEFE (III) ION W - 111
1mxr_A_1021mxr   A     FEFE (III) ION S - 114
1mxr_A_1021mxr   A     FEFE (III) ION E - 115
1mxr_A_1021mxr   A     FEFE (III) ION H - 118
1mxr_A_1021mxr   A     FEFE (III) ION Y - 122
1on3_A_4511on3   A     MCAMETHYLMALONYL-COENZYME A K - 452
1uzx_A_111uzx   A     MSOSELENOMETHIONINE SELENOXIDE Y - 25
1uzx_A_111uzx   A     MSOSELENOMETHIONINE SELENOXIDE N - 26
1uzx_A_111uzx   A     MSOSELENOMETHIONINE SELENOXIDE D - 27
1uzx_A_111uzx   A     MSESELENOMETHIONINE D - 34
1uzx_A_111uzx   A     MSESELENOMETHIONINE L - 38

Clusters included in this Subclass
CLUSTER: HH.4.213