Information on SUBCLASS 3.5.7 |
Subclass Accession number: 4710
Subclass: 3.5.7 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 17.6 +/- 17.5 Average RMSD (Å) : 0.825 +/- 0.236 Consensus geometry
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Consensus Sequence: | chhcDhp |
(φψ)-conformation: | aapabaa |
Pattern: | x | x | [KNP] | [AI] | [AVWY] | [DKN] | [D] | [GPV] | [DRS] | x | [FMTV] | x | x | [DET] | x | [IKLV] | [AET] |
Conservation: | -0.961 | -0.339 | 0.117 | 0.122 | -0.453 | 0.624 | 3.553 | -0.304 | -0.198 | -0.548 | -0.357 | -0.588 | -0.310 | 0.567 | -0.542 | -0.310 | -0.074 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ii2_A_475 | 1ii2 | A | 475 | 491 | PRKAWKDVRQFNETSKE | HHHH-S-HHHHHHHHHH | aaaaxabaaaaaaaaaa |
1mxr_A_102 | 1mxr | A | 126 | 142 | IRNIVNDPSVVFDDIVT | HHTT-S-HHHHHHHHHH | aaaababaaaaaaaaaa |
1on3_A_451 | 1on3 | A | 453 | 469 | EIKAADDPDAMRAEKIE | HHHHSS-HHHHHHHHHH | aaaaxabaaaaaaaaaa |
1uzx_A_11 | 1uzx | A | 21 | 37 | IQPIYNDGRTTFHDSLA | HHHH-TTHHHHHHHHHH | aaaaxabaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mxr_A_102 | 1mxr | A | FEFE (III) ION | W - 111 |
1mxr_A_102 | 1mxr | A | FEFE (III) ION | S - 114 |
1mxr_A_102 | 1mxr | A | FEFE (III) ION | E - 115 |
1mxr_A_102 | 1mxr | A | FEFE (III) ION | H - 118 |
1mxr_A_102 | 1mxr | A | FEFE (III) ION | Y - 122 |
1on3_A_451 | 1on3 | A | MCAMETHYLMALONYL-COENZYME A | K - 452 |
1uzx_A_11 | 1uzx | A | MSOSELENOMETHIONINE SELENOXIDE | Y - 25 |
1uzx_A_11 | 1uzx | A | MSOSELENOMETHIONINE SELENOXIDE | N - 26 |
1uzx_A_11 | 1uzx | A | MSOSELENOMETHIONINE SELENOXIDE | D - 27 |
1uzx_A_11 | 1uzx | A | MSESELENOMETHIONINE | D - 34 |
1uzx_A_11 | 1uzx | A | MSESELENOMETHIONINE | L - 38 |
Clusters included in this Subclass |
CLUSTER: HH.4.213 |