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Information on SUBCLASS 3.8.2
Subclass Accession number: 4724
Subclass: 3.8.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.9 (>75 %)  1.9.3 (>75 %)  1.9.3.1
GO : GO:0004129 (>50 %)  GO:0005386 (>50 %)  GO:0008324 (>50 %)  GO:0015002 (>50 %)  GO:0015075 (>50 %)  GO:0015077 (>50 %)  GO:0015078 (>50 %)  GO:0015399 (>50 %)  GO:0016675 (>50 %)  GO:0016676 (>50 %)  
SCOP : 81441 (>75 %)  81442 (>75 %)  81443 (>75 %)  
Number of loops: 8

Average sequence ID (%) : 12.2 +/- 14.0
Average RMSD (Å) : 0.787 +/- 0.300

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 0-45 rho (°): 315-360
Consensus Sequence: XhpXpXp
(φψ)-conformation: aapppaa
Pattern: xxx[AFKL][cfl]xx[DERST][DEKP][dekny][deqt]x
Conservation:-0.797-0.646-0.945-0.4480.356-0.668-0.2301.1822.185-0.1931.101-0.897
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cvu_A_741cvu   A7889IKLLLKPTPNTVHHHHH---HHHHaaaaaxxxaaaa
1dpg_A_4051dpg   A406417EDKKNTPEPYERHHHHH---HHHHaaaaaxxxaaaa
1eem_A_2101eem   A211222TVSALLTSEKDWHHHHH---HHHHaaaaaxxxaaaa
1h6h_A_1271h6h   A129140VRIFFYQSPYDSHHHHHS--HHHHaaaaaxxxaaaa
1iup_A_1961iup   A198209WIDALASSDEDIHHHHH---HHHHaaaaaxbxaaaa
1khb_A_5741khb   A574585MMELFSISKEFWHHHHT---HHHHaaaaapbxaaaa
1kq6_A_1121kq6   A114125LLDFFKVRPDDLHHHHHS--HHHHaaaaaxpxaaaa
1pk5_A_3221pk5   A326337ELLKCEPDEPQVHHHHTS--HHHHaaaaaxxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cvu_A_741cvu   A     BOGB-OCTYLGLUCOSIDE T - 85
1cvu_A_741cvu   A     BOGB-OCTYLGLUCOSIDE N - 87
1cvu_A_741cvu   A     BOGB-OCTYLGLUCOSIDE T - 88
1cvu_A_741cvu   A     BOGB-OCTYLGLUCOSIDE Y - 91
1cvu_A_741cvu   A     BOGB-OCTYLGLUCOSIDE I - 92
1dpg_A_4051dpg   A     PO4PHOSPHATE ION P - 414
1dpg_A_4051dpg   A     PO4PHOSPHATE ION Y - 415
1dpg_A_4051dpg   A     PO4PHOSPHATE ION M - 418
1eem_A_2101eem   A     GSHGLUTHATHIONE Y - 229
1iup_A_1961iup   A     ISBISOBUTYRIC ACID W - 198
1iup_A_1961iup   A     ISBISOBUTYRIC ACID A - 201
1iup_A_1961iup   A     ISBISOBUTYRIC ACID L - 202
1kq6_A_1121kq6   A     SULSULFATE ANION P - 112
1kq6_A_1121kq6   A     GOLGLYCEROL P - 112
1kq6_A_1121kq6   A     MSESELENOMETHIONINE H - 113
1kq6_A_1121kq6   A     SULSULFATE ANION H - 113
1kq6_A_1121kq6   A     GOLGLYCEROL H - 113
1kq6_A_1121kq6   A     MSESELENOMETHIONINE L - 114
1kq6_A_1121kq6   A     SULSULFATE ANION L - 114
1kq6_A_1121kq6   A     GOLGLYCEROL L - 115
1kq6_A_1121kq6   A     SULSULFATE ANION D - 116
1kq6_A_1121kq6   A     GOLGLYCEROL D - 116
1kq6_A_1121kq6   A     SULSULFATE ANION F - 117
1kq6_A_1121kq6   A     MSESELENOMETHIONINE F - 118
1kq6_A_1121kq6   A     GOLGLYCEROL K - 119
1kq6_A_1121kq6   A     GOLGLYCEROL V - 120

Clusters included in this Subclass
CLUSTER: HH.3.113
CLUSTER: HH.5.366