Information on SUBCLASS 3.21.1 |
Subclass Accession number: 4753
Subclass: 3.21.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.3 +/- 14.3 Average RMSD (Å) : 0.633 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXcXchX |
(φψ)-conformation: | aalpbaa |
Pattern: | x | [AV] | x | x | x | [DG] | x | [DN] | [IL] | x | [AGT] | x | x | [ANV] | [AS] | [KSW] | x | [FKT] |
Conservation: | -0.313 | 0.828 | -1.006 | -0.808 | -0.610 | 1.386 | -1.006 | 2.204 | 1.645 | -0.709 | -0.015 | -0.511 | -0.313 | -0.709 | 1.272 | -0.313 | -0.313 | -0.709 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ogl_A_172 | 1ogl | A | 182 | 199 | AAQDLDFNLVGYYVAKYT | HHHHTT--HHHHHHHHHH | aaaaalbxaaaaaaaaaa |
1qgu_A_154 | 1qgu | A | 154 | 171 | PVGLIGDDISAVANASSK | HHHHTT--HHHHHHHHHH | aaaaavxbaaaaaaaaaa |
1qtm_A_626 | 1qtm | A | 630 | 647 | RVFQEGRDIHTETASWMF | HHHHTT--HHHHHHHHHH | aaaaalxbaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qgu_A_154 | 1qgu | A | CLFFE(8)-S(7) CLUSTER | P - 154 |
1qtm_A_626 | 1qtm | A | TTPTHYMIDINE-5'-TRIPHOSPHATE | H - 639 |
Clusters included in this Subclass |
CLUSTER: HH.5.275 |